Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_031304.1 Length=10306 Score E Sequences producing significant alignments: (Bits) Value seq5447 107 1e-19 >seq5447 Length=4366 Score = 107 bits (118), Expect = 1e-19 Identities = 397/618 (64%), Gaps = 42/618 (7%) Strand=Plus/Minus Query 5306 ATCGGGCTGAAAGGGAAAGAAAGAGAACTAAAGGAAATAGGAAGGTTCTTTTCTTTAATG 5365 || || || |||| |||||||||||| |||| ||| || || | ||||| ||||| Sbjct 2774 ATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTAATG 2715 Query 5366 ACATGGGCTCTAAGGGAATATTTCGTCTCTACTGAGTATTTGATCAAAACTTACTTCGTT 5425 | |||| | || ||||||||||| ||| || || | || |||| || | | | Sbjct 2714 TCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTACTTA 2655 Query 5426 CCATTATTTGAGGGACTCACTATGGCTGATGATCTGAAAGGAGTGACTCGCAAGAT---- 5481 || | ||| | | | || |||| |||||| ||| | | ||| | ||||| Sbjct 2654 CCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATGATG 2595 Query 5482 ----TCTCGACTGCTCCGCTGGCCAGGGGAATAAAAACAGCTGCGATGTAGGGTTCGCCA 5537 | |||| | | | | || | | |||| || | |||| | |||| Sbjct 2594 GATATATCGAGATCCCAAATTGACACTGATACAAAATCAATT----TGTA----TTGCCA 2543 Query 5538 ATCATCTAG-ACTACGAGAAATGGAACAACCATCAACG----GAAGGAATCAACTTCTCC 5592 | || || | | ||| |||||||||||||||||| | |||| | |||| || Sbjct 2542 ACCACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAAC----CC 2487 Query 5593 TGTTTTTACCGTCATGGGGCAATTCCTAGGGCTTCCCAAATTAATAGCTAGGACACACGA 5652 || ||| || |||||| |||| ||||| |||||| ||| | | | || || || Sbjct 2486 AGTATTTGAAGTAATGGGGAAATTTGTAGGGTATCCCAACTTATTTACCCGCACGCATGA 2427 Query 5653 ATTTTTTGAACAAAGTTTTATTTACTACGGAGATCGTCCCGATT---TGATGACCATCAA 5709 ||||| || | ||| ||||||||| ||||| | || ||| | || | || Sbjct 2426 GATTTTTCAAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCAC 2367 Query 5710 GGATGGAGAAATTGTCAACGTCGATGAAAACCAGAAAGTCT--GCTGGAATGGTCAATTG 5767 ||||||||||| | ||| | || || || | | |||||||| ||| Sbjct 2366 AGATGGAGAAATCGA----GTC----ACAAGGGGATTGTTTTTGTTGGAATGGGCAAGAT 2315 Query 5768 GGGGGACTGGAAGGGCTTCGACAAAAAGGATGGAGCGTACTTAATCTTCTTGTGATCTTA 5827 ||||| | |||||||| | ||||| |||||||| || ||||| | || || || Sbjct 2314 GGGGGTTTAGAAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTGGTTATAGAT 2255 Query 5828 AGAGAATCTAAAATTCGAAACACGAAGGTCAGAGTCCTTGCTCAAGGGGACAATCAAGTG 5887 |||| |||||||||||| || || || |||| | ||||| || || ||||||| Sbjct 2254 AGAG----TAAAATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCC 2199 Query 5888 ATCTGCACAAAATACAAA 5905 || || || |||||||| Sbjct 2198 ATTTGTACTCAATACAAA 2181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32828893976840