Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_031691.1 Length=11238 Score E Sequences producing significant alignments: (Bits) Value seq5447 163 2e-36 seq50365 86.0 4e-13 seq10641 78.8 7e-11 >seq5447 Length=4366 Score = 163 bits (180), Expect = 2e-36 Identities = 445/672 (66%), Gaps = 21/672 (3%) Strand=Plus/Plus Query 4237 GTATTGTGTACATATGACTTGATTGTCACCCTGTGCCAATATTTGAACCCTGGTGTTACG 4296 |||||| ||||| ||| ||||||| || ||||| ||||| | | ||| | || || || Sbjct 2184 GTATTGAGTACAAATGGCTTGATTATCTCCCTGAGCCAACACTCCAACTTTTGTATTTCG 2243 Query 4297 TCTGATGCTGGCTCGACGAATAATTAGCAGGTTGGTTATACTCCATCCTTTTTGCCTAAG 4356 | | || || | ||| || | || |||||||||||| |||||||| || Sbjct 2244 AATTTTACTCTATCTA----TAACCAGTAAATTAACTATACTCCATCCCTTTTGCCTCAG 2299 Query 4357 CCCCTCTAGTCCACCAGATTGCCCCGACCAGCAGACTCTATGTCCCCTTTT-ATTAACTA 4415 ||| |||| || ||| |||||| ||| || | | || |||||| | | | | | Sbjct 2300 CCCTTCTAAACCCCCATCTTGCCCATTCCAACAAAAACAAT--CCCCTTGTGACT--CGA 2355 Query 4416 TCTGTCCATCGATAATCTCCATCAG---ATCTGGTCTTTGATTGTAATAAATCAGACTCT 4472 | | |||||| | | | || || ||||||||| | ||| ||||| | | || Sbjct 2356 TTTCTCCATCTGTGGTTACTATAAGTTGATCTGGTCTATCTCAGTAGTAAATTAAAGACT 2415 Query 4473 GTTCAAAGAATTCATGGGTTCTAGATATTAAGTTGGGGTATCCCAAAAATTGTCCCATTA 4532 || ||| | ||||| || | | | ||||||||| || || | ||||| ||||||| Sbjct 2416 TTTGAAAAATCTCATGCGTGCGGGTAAATAAGTTGGGATACCCTACAAATTTCCCCATTA 2475 Query 4533 CCTTGAATGTGGGATTATTGGCTGCTCCCCTCTGATGATTGTTCCATTTTTCATAAT-CT 4591 | | ||| || || |||||| | | || ||||| |||||||||||| |||| | Sbjct 2476 CTTCAAATACTGGGTTGTTGGCTTCGGCTCTTTGATGGTTGTTCCATTTTGAGTAATCCG 2535 Query 4592 ACATGGTTGGCAAAGCTTACATGATCATAAT-TATCCGTACC--TTGACCATAT-GTGTT 4647 | |||||||||| |||| | || | |||| || | || || | | | Sbjct 2536 AGGTGGTTGGCAA----TACAAATTGATTTTGTATCAGTGTCAATTTGGGATCTCGATAT 2591 Query 4648 GTCCATTAATTTTTTAGTCAAAACGGTGGAGTTATCTGCCATGGTTAGACCTTTAAATAA 4707 ||||| | || ||| |||| || | | |||||||| ||| | || ||||| | Sbjct 2592 ATCCATCATCTTCTTAATCAATGTTGTCAAATCATCTGCCACGGTCAAACTATTAAAAAG 2651 Query 4708 TGGGACAAAATGCTTCTTGATCAGATATTCTGTTATTACGAAGTATTCTCTCAACTCCCA 4767 || | ||| || || || || ||||| || | ||||| |||||||||| |||||| Sbjct 2652 AGGTAAGTAATATTTTTTAATGAGGTATTCGGTAACCACGAAATATTCTCTCATCTCCCA 2711 Query 4768 GGACATGAGCGCAAAAAATCTTCCTTTTATTTTCAGTTCACGCTCTTTGCCTTTAAGTCC 4827 ||||| || | |||| |||| || | | ||| | ||| | ||||| |||| ||||| Sbjct 2712 AGACATTAGGGAAAAATATCTACCCTCTTCTTTTACTTCTCTTTCTTTAGCTTTGAGTCC 2771 Query 4828 GATAAGAAGTTTCTCCTTATCCAGCCCCTGGTCATTGATGCTTCTCAAGAATTCAGGCCA 4887 || | || || ||||| | || | ||||| || || |||||||| ||||| Sbjct 2772 AATTATGTAATTATCATTATCTAATCCTTCATCATTTATCTTTTGTAAGAATTCCGGCCA 2831 Query 4888 ATTGGTCTGTTT 4899 ||| |||| ||| Sbjct 2832 ATTTGTCTCTTT 2843 >seq50365 Length=2724 Score = 86.0 bits (94), Expect = 4e-13 Identities = 171/251 (68%), Gaps = 7/251 (3%) Strand=Plus/Minus Query 4646 TTGTCCATTAATTTTTTAGTCAA---AACGGTGGAGTTATCTGCCATGGTTAGACCTTTA 4702 ||||||| |||||||||||||| ||| | | |||||||||||| | || || | Sbjct 1922 TTGTCCAATAATTTTTTAGTCAGTGTAACTATA---TCATCTGCCATGGTAATACTTTCA 1866 Query 4703 AATAATGGGACAAAATGCTTCTTGATCAGATATTCTGTTATTACGAAGTATTCTCTCAAC 4762 || || || | || ||| | ||| | | ||| || || || | ||| ||||||| || Sbjct 1865 AACAAGGGTAAAATATGTTCCTTCAGTAAATACTCAGTAATAAAGAAATATTCTCGTAAG 1806 Query 4763 TCCCAGGACATGAGCGCAAAAAATCTTCCTTTTATTTTCAGTTCACGCTCTTTGCCTTTA 4822 |||| ||||| || || |||| |||||||| | |||| | || | ||||| || | Sbjct 1805 GCCCATGACATTAGGGCGAAAATTCTTCCTTCTCTTTTGACCTCTCTTTCTTTTGCTCTT 1746 Query 4823 AGTCCGATAAGAAGTTTCTCCTTATCCAGCCCCTGGTCATTGATGCTTCTCAAGAATTCA 4882 | || |||| | | |||| || | | | ||||||||| | | | ||| | Sbjct 1745 AACCCTATAATTAACTCATCCTGTTCTA-AACTTTGTCATTGATTTTGGTAATAAATGCT 1687 Query 4883 GGCCAATTGGT 4893 ||||||||||| Sbjct 1686 GGCCAATTGGT 1676 >seq10641 Length=650 Score = 78.8 bits (86), Expect = 7e-11 Identities = 79/103 (77%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 3285 TCCTTATTGTTTTTGAATTTTCAAATAACCCTATAAGAGACTCTGTAATGCCTAAGTACG 3344 ||||||| ||||| | |||||||||||||||||||| ||| | | || |||| | | Sbjct 583 TCCTTATGGTTTTAGCATTTTCAAATAACCCTATAACAGAATTAGATATTCCTATAAATG 524 Query 3345 TTGCAGATTTGTATTCACTCAGAAATCTAGGGAATAATGGCTT 3387 | || | |||| ||||||| | |||||| ||||| || || || Sbjct 523 TCGCTGCTTTGAATTCACTTATAAATCTTGGGAACAAGGGATT 481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35808108113784