Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_030922.1 Length=6673 Score E Sequences producing significant alignments: (Bits) Value seq89925 316 9e-83 >seq89925 Length=3089 Score = 316 bits (350), Expect = 9e-83 Identities = 243/287 (85%), Gaps = 1/287 (0%) Strand=Plus/Plus Query 5073 AAGAAGCTGGATTGGATTCCCTGCCGGGGGCTGGTGCAGAAATATTGAACGACCGTGTCC 5132 ||||| | |||||||||||||| ||||| |||||||| ||||| |||||||||||||||| Sbjct 17 AAGAATCCGGATTGGATTCCCTACCGGGTGCTGGTGCTGAAATCTTGAACGACCGTGTCC 76 Query 5133 GTATATTGATCTCTATGGGTAAATGTGGTGGTCAAGAATGGTTGGATGTGATGCGTGCTG 5192 || ||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 77 GTCGATTGATCTCGAAGGGCAAATGTGGTGGTCAAGAATGGCTGGATGTGATGCGTGCTG 136 Query 5193 CCCACAAAATCAATCTTCCAACTTCGGCAACCATGATGTTTGGACATATGGGAAACAATC 5252 | || || ||||| || || || || ||||||||||||||||||||||| ||||| || Sbjct 137 CACATAAGATCAACCTACCTACATCAGCAACCATGATGTTTGGACATAT-AGAAACCATT 195 Query 5253 GAAGAACGTTTCGAGCACTTGGTATGGCTTCGCGAAGTACAAAGCGAAAAACCAGCCGAT 5312 || |||||||| |||||| |||| ||| | || || || || |||||||||||||| ||| Sbjct 196 GAGGAACGTTTTGAGCACCTGGTTTGGATCCGTGAGGTTCAGAGCGAAAAACCAGCTGAT 255 Query 5313 GCTTATGGATTCATCGCCTTTATCCCTTGGCCTTTCCAAGAGGATGG 5359 ||| || || || |||||||| |||||||| |||||||| ||||| Sbjct 256 CATTACGGTTTTATAGCCTTTATTCCTTGGCCATTCCAAGATGATGG 302 Score = 145 bits (160), Expect = 3e-31 Identities = 166/222 (75%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 4870 GAAACCTTCCGCTATTGGTGGTGATCAATTACTTCTACAAGGTGGACATCACCCTGACCT 4929 ||||||||||| | |||||||||||||||| || |||| ||||||||||| || || | Sbjct 2869 GAAACCTTCCGTT-TTGGTGGTGATCAATTGCTGTTACAGGGTGGACATCATCCGGATTT 2927 Query 4930 TGGATTGAGTTTCTACACCAACCTTTTCAAACAACTAAAGGAACTTTACCCAACCCTTAG 4989 || | ||||| | || || ||||| ||| | ||||| || ||||| ||| | | Sbjct 2928 GGGTCTTTCCTTCTATGCTAATCTGTTCAAGCAATTGAAGGAGCTATACCCTACCTTAAA 2987 Query 4990 GCTTCTCTCCTTAGGGCCACCAGAAATTGCGCACGTAGCAAAACTGGAAGGCATGAGCCA 5049 | | | |||| |||| ||||| ||||| ||||| | || ||| | |||||||||||||| Sbjct 2988 GTTACACTCCCTAGGCCCACCTGAAATAGCGCATATCGCTAAATTAGAAGGCATGAGCCA 3047 Query 5050 CCTTGAAGTCTGGACGGCCATTCAAGAAGCTGGATTGGATTC 5091 ||||||| || ||| | ||||| | ||||||||||| Sbjct 3048 TATTGAAGTACTCACTGCCCTCAAAGAATCCGGATTGGATTC 3089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 21195335852048