Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_031216.1 Length=15462 Score E Sequences producing significant alignments: (Bits) Value seq8877 91.5 1e-14 >seq8877 Length=4607 Score = 91.5 bits (100), Expect = 1e-14 Identities = 100/129 (78%), Gaps = 3/129 (2%) Strand=Plus/Plus Query 9743 TTCTTAAATT-AATCGGACCCCCTCTAAAAAGAGAAGAAACATGGTCATCATCCAATCTA 9801 |||||||| ||||||||| || ||||||||||||||||| ||||| || |||||| | Sbjct 4205 TTCTTAAAGACAATCGGACCTCCCCTAAAAAGAGAAGAAACCTGGTCTTCCTCCAATTTC 4264 Query 9802 TTCATATATGGAAAA-GTCATGTTTTTAAATGGATGTCCGCTAACAATGTCCCAAAAGAA 9860 ||||| ||||||||| || ||||| || ||| | ||||| | ||| | ||||| Sbjct 4265 TTCATTTATGGAAAATATCCTGTTTGGAAGGGGA-GGCCGCTCAGTATGAGTCTGAAGAA 4323 Query 9861 AATCTGTCG 9869 |||||| || Sbjct 4324 AATCTGCCG 4332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 49333428185450