Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_031270.1
Length=10787
Score E
Sequences producing significant alignments: (Bits) Value
seq1247 87.8 1e-13
>seq1247
Length=281634
Score = 87.8 bits (96), Expect = 1e-13
Identities = 101/134 (75%), Gaps = 4/134 (3%)
Strand=Plus/Minus
Query 5917 AAGGAACGAGAAATGAAGGTAGAACCGAGGTTGTTTGCTATGATGGTATTAGAAATGAGA 5976
|| || |||||| ||| || || | |||||||||||||||||||| | |||||||||
Sbjct 212946 AAAGAGCGAGAAGAAAAGATAAAATCAAGGTTGTTTGCTATGATGGTTCTGGAAATGAGA 212887
Query 5977 CTCTACT--ATTGTGCTCTAGAGAAAAATTTAGCCGAGAAAATACTAGAGTACTTCCCGC 6034
|| |||| | | || |||||||||| | || ||| || || | |||| |||| |
Sbjct 212886 CTATACTTCAATATG--ACAGAGAAAAATCTTGCTGAGCAATTATTCAAGTATATCCCTC 212829
Query 6035 AACAAACCATGACT 6048
||||||| ||||||
Sbjct 212828 AACAAACAATGACT 212815
Score = 87.8 bits (96), Expect = 1e-13
Identities = 101/134 (75%), Gaps = 4/134 (3%)
Strand=Plus/Minus
Query 5917 AAGGAACGAGAAATGAAGGTAGAACCGAGGTTGTTTGCTATGATGGTATTAGAAATGAGA 5976
|| || |||||| ||| || || | |||||||||||||||||||| | |||||||||
Sbjct 219496 AAAGAGCGAGAAGAAAAGATAAAATCAAGGTTGTTTGCTATGATGGTTCTGGAAATGAGA 219437
Query 5977 CTCTACT--ATTGTGCTCTAGAGAAAAATTTAGCCGAGAAAATACTAGAGTACTTCCCGC 6034
|| |||| | | || |||||||||| | || ||| || || | |||| |||| |
Sbjct 219436 CTATACTTCAATATG--ACAGAGAAAAATCTTGCTGAGCAATTATTCAAGTATATCCCTC 219379
Query 6035 AACAAACCATGACT 6048
||||||| ||||||
Sbjct 219378 AACAAACAATGACT 219365
Score = 84.2 bits (92), Expect = 2e-12
Identities = 100/134 (75%), Gaps = 4/134 (3%)
Strand=Plus/Minus
Query 5917 AAGGAACGAGAAATGAAGGTAGAACCGAGGTTGTTTGCTATGATGGTATTAGAAATGAGA 5976
|| || |||||| ||| || || | ||||||||||||||||||| | |||||||||
Sbjct 216148 AAAGAGCGAGAAGAAAAGATAAAATCAAGGTTGTTTGCTATGATGGCTCTGGAAATGAGA 216089
Query 5977 CTCTACT--ATTGTGCTCTAGAGAAAAATTTAGCCGAGAAAATACTAGAGTACTTCCCGC 6034
|| |||| | | || |||||||||| | || ||| || || | |||| |||| |
Sbjct 216088 CTATACTTCAATATG--ACAGAGAAAAATCTTGCTGAGCAATTATTCAAGTATATCCCTC 216031
Query 6035 AACAAACCATGACT 6048
||||||| ||||||
Sbjct 216030 AACAAACAATGACT 216017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 34385180377912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |