Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_031276.1 Length=7202 Score E Sequences producing significant alignments: (Bits) Value seq8877 78.8 4e-11 >seq8877 Length=4607 Score = 78.8 bits (86), Expect = 4e-11 Identities = 88/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 2321 GATTTCTCTAAATGGAACTCTAACATGAGAGAAGCAGAAACT-CATGGTATTTTTCAAGC 2379 ||||| || ||||||||| ||| |||||||||| |||||| ||| | || ||| | Sbjct 1890 GATTTTTCCAAATGGAACAGTAATATGAGAGAAGAAGAAACAGCATCGATGTTCTCA-GA 1948 Query 2380 ATTTGATCAATTGTTCGGATTTACAAATTGTTTTCAACGAACTCATGAGATGTTT 2434 |||||||| ||||| || || || || |||||| | || | |||||||||||| Sbjct 1949 TTTTGATCACTTGTTTGGGTTAACCAACTGTTTTAGAAGATCCCATGAGATGTTT 2003 Score = 78.8 bits (86), Expect = 4e-11 Identities = 88/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 2321 GATTTCTCTAAATGGAACTCTAACATGAGAGAAGCAGAAACT-CATGGTATTTTTCAAGC 2379 ||||| || ||||||||| ||| |||||||||| |||||| ||| | || ||| | Sbjct 3791 GATTTTTCCAAATGGAACAGTAATATGAGAGAAGAAGAAACAGCATCGATGTTCTCA-GA 3849 Query 2380 ATTTGATCAATTGTTCGGATTTACAAATTGTTTTCAACGAACTCATGAGATGTTT 2434 |||||||| ||||| || || || || |||||| | || | |||||||||||| Sbjct 3850 TTTTGATCACTTGTTTGGGTTAACCAACTGTTTTAGAAGATCCCATGAGATGTTT 3904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 22919189153392