Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_028394.1
Length=2698
Score E
Sequences producing significant alignments: (Bits) Value
seq123 78.8 2e-11
>seq123
Length=861190
Score = 78.8 bits (86), Expect = 2e-11
Identities = 162/232 (70%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 2022 ACGAGAATGGATAGGTAGAGGCCAAGGAGTGACGATGACCAACACAAGAGCGGGTTATCT 2081
||||||||||||||||||||| || | || || || || ||||||||||| || | |
Sbjct 663742 ACGAGAATGGATAGGTAGAGGACATGCCGTAACAATCACGAACACAAGAGCTGGCTTCAT 663683
Query 2082 CATGGTGTTTGGACAGGGACCAGT-GGCCTTACGGCAACTCATTGTGAAGATCAGTGC-C 2139
||||| || ||||||||||| || ||||| | || | | ||||| | ||| |
Sbjct 663682 GATGGTTTTCGGACAGGGACCCGTAGGCCTGA-GGTTGTTGGTGTTGAAGGT--TTGCAC 663626
Query 2140 TGC-ATAGCATGGGCCTGCCTACTGATAACGCACACCAGCAACATAGTAGCTCTAGCTAG 2198
|| ||||||| ||||| |||||||||||| | ||| |||||||| |
Sbjct 663625 AGCTGGAGCATGGTTGTGCCTGCTGATAACGCACCAAAATAACTGGACGGCTCTAGCGTG 663566
Query 2199 TTTGTCTCTGGTGTT-TTGTTTACAGAGTGAGAGAGCAACATCAGTAATGCT 2249
|| | | ||||| | | |||||||| || ||| || ||||||||||
Sbjct 663565 CATGAGT-TTGTGTTACTTCATGCAGAGTGAAAGGGCATCAACAGTAATGCT 663515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8524637506656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |