Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_031217.1 Length=10925 Score E Sequences producing significant alignments: (Bits) Value seq269 78.8 6e-11 >seq269 Length=486792 Score = 78.8 bits (86), Expect = 6e-11 Identities = 76/98 (78%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 5306 TTTGGGCTGTTAACTATCaaaaaaaGACTGTATGTAGTGATCACAGAGGCATTATTAGCA 5365 || ||||| ||||||| | || || ||||| | ||| | ||||||||||| || || Sbjct 390711 TTCGGGCTTCTAACTATTCACAAGAGGATGTATTTGGTGTTGTCAGAGGCATTAATATCA 390770 Query 5366 CAACATATCCTCCCTTACTTTCCTGAAATAACCATGAC 5403 |||||||| |||||||||||| ||| ||||||| || Sbjct 390771 GAACATATCATCCCTTACTTTCACGAAGTAACCATAAC 390808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34844096744824