Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogonomyrmex_20barbatus_20[refseq_20GCF_5F000187915.1_202011-02-04] 4,645 sequences; 235,645,958 total letters Query= NC_014791.1 Length=9070 Score E Sequences producing significant alignments: (Bits) Value seq4286 91.5 9e-15 >seq4286 Length=2705398 Score = 91.5 bits (100), Expect = 9e-15 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 7323 GAAGATACATGTCTCTGCTTTAATGCTTTCAATGGACTTCCTGGGCCATACATAAAATGG 7382 |||||||| |||||||||||||| || | || || ||||| || || || || |||||| Sbjct 741420 GAAGATACTTGTCTCTGCTTTAACGCGCTGAAAGGTCTTCCGGGACCTTATATCAAATGG 741361 Query 7383 TTTTTAAAAGAATTGGGTCTTGAAGGTGTTGTTAAAATGCTGTCAGCATTTGGAGATAAA 7442 || | || || |||| | |||||| || ||||||||| | | |||| ||||||| Sbjct 741360 TTCCTCGAAAAACTGGGCCCCGAAGGTCTTCATAAAATGCTCTTTGGTTTTGAAGATAAA 741301 Query 7443 TCAGCGTACGCACTATGCACATTCG 7467 || || | || | ||||| |||| Sbjct 741300 TCGGCAGAGGCGGTTTGCACGTTCG 741276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28907289334520