Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_013135.1
Length=12390
Score E
Sequences producing significant alignments: (Bits) Value
seq44943 82.4 6e-12
>seq44943
Length=2415
Score = 82.4 bits (90), Expect = 6e-12
Identities = 163/238 (68%), Gaps = 5/238 (2%)
Strand=Plus/Minus
Query 7602 AAAATCGATGGGAGGTTCTTCTCTTTAATGTCTTGGGACA-TCCGCGACTACTTTGTCAT 7660
||| || | || || || || | ||||||||||||| ||| | | |||||||||||||
Sbjct 866 AAACTCAAGGGAAGATTATTTTGTTTAATGTCTTGG-ACACTAAGAGACTACTTTGTCA- 809
Query 7661 GACTGAATACCTCATTAAGACCCACTTTGTCCCCTTATTCAAAGGGCTGACCATGGCAGA 7720
|||| || | || |||| ||||| || ||| | || | || || || ||||||||
Sbjct 808 --CTGAGTATTTGATAAAGAATCACTTCGTTCCCCTCTTTTACGGACTAACAATGGCAGA 751
Query 7721 TGACCTCACAACAGTAATTGGCAAGATATTGGAGAACTCTCGGGGTCAGGGAGAGGCAGA 7780
||| | ||||| ||||| ||||| |||| | ||| | | || || | ||
Sbjct 750 TGATTTAACAACTGTAATGAAAAAGATGATGGAAAGCTCCAGTGCACAAGGGTCTGATGA 691
Query 7781 CTATGAGAACTTGACTATCACTGATCACATTGACTATGAAAAATGGAACAACCACCAG 7838
||| || || | |||| | | ||| | ||||| || || || || |||||||||
Sbjct 690 CTACGAATACATTTCTATAGCAAACCACCTAGACTACGAGAAGTGTAATAACCACCAG 633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 39494254037520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |