Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_013135.1 Length=12390 Score E Sequences producing significant alignments: (Bits) Value seq44943 82.4 6e-12 >seq44943 Length=2415 Score = 82.4 bits (90), Expect = 6e-12 Identities = 163/238 (68%), Gaps = 5/238 (2%) Strand=Plus/Minus Query 7602 AAAATCGATGGGAGGTTCTTCTCTTTAATGTCTTGGGACA-TCCGCGACTACTTTGTCAT 7660 ||| || | || || || || | ||||||||||||| ||| | | ||||||||||||| Sbjct 866 AAACTCAAGGGAAGATTATTTTGTTTAATGTCTTGG-ACACTAAGAGACTACTTTGTCA- 809 Query 7661 GACTGAATACCTCATTAAGACCCACTTTGTCCCCTTATTCAAAGGGCTGACCATGGCAGA 7720 |||| || | || |||| ||||| || ||| | || | || || || |||||||| Sbjct 808 --CTGAGTATTTGATAAAGAATCACTTCGTTCCCCTCTTTTACGGACTAACAATGGCAGA 751 Query 7721 TGACCTCACAACAGTAATTGGCAAGATATTGGAGAACTCTCGGGGTCAGGGAGAGGCAGA 7780 ||| | ||||| ||||| ||||| |||| | ||| | | || || | || Sbjct 750 TGATTTAACAACTGTAATGAAAAAGATGATGGAAAGCTCCAGTGCACAAGGGTCTGATGA 691 Query 7781 CTATGAGAACTTGACTATCACTGATCACATTGACTATGAAAAATGGAACAACCACCAG 7838 ||| || || | |||| | | ||| | ||||| || || || || ||||||||| Sbjct 690 CTACGAATACATTTCTATAGCAAACCACCTAGACTACGAGAAGTGTAATAACCACCAG 633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39494254037520