Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_020805.1
Length=11120
Score E
Sequences producing significant alignments: (Bits) Value
seq44943 123 2e-24
>seq44943
Length=2415
Score = 123 bits (136), Expect = 2e-24
Identities = 168/231 (73%), Gaps = 5/231 (2%)
Strand=Plus/Minus
Query 6344 GGTAGATTTTTCTCATTGATGTCTTGGAAGCTTAGGGAATACTTTGTTGTCACAGAGTAT 6403
|| ||||| || | || |||||||||| || || || |||||||| ||| ||||||
Sbjct 857 GGAAGATTATTTTGTTTAATGTCTTGGACACTAAGAGACTACTTTGT---CACTGAGTAT 801
Query 6404 TTGATCAAGACTCACTTTGTGCCATTGTTCCATGGGCTGACCATGGCTGATGATATGACA 6463
||||| |||| |||||| || || | || | || || || ||||| |||||| | |||
Sbjct 800 TTGATAAAGAATCACTTCGTTCCCCTCTTTTACGGACTAACAATGGCAGATGATTTAACA 741
Query 6464 GCAGTGATCAAAAAGATGCTGGAAAGCTCGTCTGGTCAAGGG-CTAACAAACTACGACAG 6522
| || || ||||||||| |||||||||| || |||||| || | |||||||
Sbjct 740 ACTGTAATGAAAAAGATGATGGAAAGCTCCAGTGCACAAGGGTCTGA-TGACTACGAATA 682
Query 6523 CGTTTGTATTGCAAATCATATTGACTATGAAAAATGGAATAATCATCAACG 6573
| ||| ||| ||||| || | ||||| || || || ||||| || || ||
Sbjct 681 CATTTCTATAGCAAACCACCTAGACTACGAGAAGTGTAATAACCACCAGCG 631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35434216589920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |