Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_022580.1
Length=12676
Score E
Sequences producing significant alignments: (Bits) Value
seq44943 98.7 8e-17
>seq44943
Length=2415
Score = 98.7 bits (108), Expect = 8e-17
Identities = 160/230 (70%), Gaps = 3/230 (1%)
Strand=Plus/Minus
Query 7753 AGGGTCGATTTTTCTCTTTAATGTCATGGGAATTACGGGAATATTTTGTTGTAACAGAAT 7812
|||| |||| || | ||||||||| ||| | || | || || ||||| || || |
Sbjct 859 AGGGAAGATTATTTTGTTTAATGTCTTGGACACTAAGAGACTACTTTGTC---ACTGAGT 803
Query 7813 ACTTAATTAAAGAGCATTTTGTTCCATTGTTCCATGGATTAACGATGGCAGATGATTTAA 7872
| || || || | || || ||||| | || | ||| |||| ||||||||||||||||
Sbjct 802 ATTTGATAAAGAATCACTTCGTTCCCCTCTTTTACGGACTAACAATGGCAGATGATTTAA 743
Query 7873 CCACTGTGATGAAAAAGATGCTGGACAATACAATCGGCCAAGGTGGCAAGGACTACACAC 7932
| ||||| |||||||||||| |||| | | | | ||||| | |||||| |
Sbjct 742 CAACTGTAATGAAAAAGATGATGGAAAGCTCCAGTGCACAAGGGTCTGATGACTACGAAT 683
Query 7933 AAATTTGCATAGCCAATCACTTTGATTATGAGAAATGGAACAATCATCAG 7982
| |||| ||||| || ||| | || || ||||| || || || || |||
Sbjct 682 ACATTTCTATAGCAAACCACCTAGACTACGAGAAGTGTAATAACCACCAG 633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40408561683200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |