Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_022755.1
Length=10692
Score E
Sequences producing significant alignments: (Bits) Value
seq44943 107 1e-19
>seq44943
Length=2415
Score = 107 bits (118), Expect = 1e-19
Identities = 155/216 (72%), Gaps = 7/216 (3%)
Strand=Plus/Minus
Query 6002 TAATGTCTTGGAAATTAAGAGAATACTTCGTGATAACAGAGTATCTCATAAAGACTCATT 6061
|||||||||||| | ||||||| ||||| | | || |||||| | ||||||| ||| |
Sbjct 841 TAATGTCTTGGACACTAAGAGACTACTTTG---TCACTGAGTATTTGATAAAGAATCACT 785
Query 6062 TTGTTCCTTTGTTTCACGGGCTCACCATGGCGGACGACCTGACAGCTGTTATGAAGAAAA 6121
| ||||| | ||| |||| || || ||||| || || | ||| |||| ||||| || |
Sbjct 784 TCGTTCCCCTCTTTTACGGACTAACAATGGCAGATGATTTAACAACTGTAATGAAAAAGA 725
Query 6122 TGATGGAGTCATCTTCA--GGACAAGGCGCCTCCGACTATGATGCCATTGCCATTGCGAA 6179
||||||| | || || | |||||| | ||||| || |||| | || || ||
Sbjct 724 TGATGGA--AAGCTCCAGTGCACAAGGGTCTGATGACTACGAATACATTTCTATAGCAAA 667
Query 6180 CCATATTGACTATGAAAAATGGAATAACCATCAACG 6215
||| | ||||| || || || |||||||| || ||
Sbjct 666 CCACCTAGACTACGAGAAGTGTAATAACCACCAGCG 631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 34065952001280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |