Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_025358.1
Length=15024
Score E
Sequences producing significant alignments: (Bits) Value
seq44943 95.1 1e-15
>seq44943
Length=2415
Score = 95.1 bits (104), Expect = 1e-15
Identities = 154/221 (70%), Gaps = 3/221 (1%)
Strand=Plus/Minus
Query 10191 GGTAGATTCTTTTCTTTAATGTCTTACGAATTGAGGGATTATTTTGTATCTACTGAATAC 10250
|| ||||| |||| ||||||||||| | | || || || ||||| ||||| ||
Sbjct 857 GGAAGATTATTTTGTTTAATGTCTTGGACACTAAGAGACTACTTTGTC---ACTGAGTAT 801
Query 10251 CTGATCAAGAAATATTTTGTACCCTTATTTGAAGGTCTAACAATGGCTGATGATTTGAAT 10310
|||| ||||| | || || ||| | ||| | || ||||||||||| |||||||| |
Sbjct 800 TTGATAAAGAATCACTTCGTTCCCCTCTTTTACGGACTAACAATGGCAGATGATTTAACA 741
Query 10311 ACAGTAATTAAGAAGATGTTGGATGTCTCAAGCGGCCAGGGAACCAGAGAATATGATTAT 10370
|| ||||| || |||||| |||| ||| || | || || | || || || ||
Sbjct 740 ACTGTAATGAAAAAGATGATGGAAAGCTCCAGTGCACAAGGGTCTGATGACTACGAATAC 681
Query 10371 ATAACTATTGCAAACAACATCGATTATGAAAAATGGAATAA 10411
|| |||| |||||| || | || || || || || |||||
Sbjct 680 ATTTCTATAGCAAACCACCTAGACTACGAGAAGTGTAATAA 640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 47910339838270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |