Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_025371.1
Length=11082
Score E
Sequences producing significant alignments: (Bits) Value
seq44943 98.7 7e-17
>seq44943
Length=2415
Score = 98.7 bits (108), Expect = 7e-17
Identities = 159/228 (70%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 6332 GGAAGGTTCTTTTCACTGATGTCTTGGCAGTTGAGAGAGTACTTTGTGATAACGGAATAT 6391
||||| || |||| | ||||||||| | ||||| |||||||| | | || |||
Sbjct 857 GGAAGATTATTTTGTTTAATGTCTTGGACACTAAGAGACTACTTTGTCA---CTGAGTAT 801
Query 6392 CTGATTAAGACCCATTATGTTCCACTATTTAAAGGATTGACTATGGCAGATGACCTCACA 6451
|||| |||| || | ||||| || ||| | ||| | || ||||||||||| | |||
Sbjct 800 TTGATAAAGAATCACTTCGTTCCCCTCTTTTACGGACTAACAATGGCAGATGATTTAACA 741
Query 6452 TCAGTCGTGAAGAAGATGTTGGACAACACAAACGGACAAGGATTAGACGACTATTCATCG 6511
| || |||| |||||| |||| | | | | | |||||| | || ||||| ||
Sbjct 740 ACTGTAATGAAAAAGATGATGGAAAGCTCCAGTGCACAAGGGTCTGATGACTACGAATAC 681
Query 6512 ATTTGTATAGCGAATCACATTGATTACGAAAAATGGAACAATCATCAG 6559
|||| |||||| || ||| | || ||||| || || || || || |||
Sbjct 680 ATTTCTATAGCAAACCACCTAGACTACGAGAAGTGTAATAACCACCAG 633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35312735154480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |