Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_025378.1
Length=11202
Score E
Sequences producing significant alignments: (Bits) Value
seq44943 104 2e-18
>seq44943
Length=2415
Score = 104 bits (114), Expect = 2e-18
Identities = 160/225 (71%), Gaps = 5/225 (2%)
Strand=Plus/Minus
Query 6383 TTCTTTTCTCTCATGTCTTGGAAATTGAGAGAATACTTCGTCATAACCGAGCACCTAATT 6442
|| |||| | | |||||||||| | | ||||| ||||| |||| | ||| | | ||
Sbjct 851 TTATTTTGTTTAATGTCTTGGACACTAAGAGACTACTTTGTCA---CTGAGTATTTGATA 795
Query 6443 AAGACTCACTTTGTCCCTCTGTTCCACGGACTTACGATGGCAGATGATCTCACATCAGTG 6502
|||| |||||| || || || || ||||||| || |||||||||||| | ||| | ||
Sbjct 794 AAGAATCACTTCGTTCCCCTCTTTTACGGACTAACAATGGCAGATGATTTAACAACTGTA 735
Query 6503 ATCAAGAAGATGATGGACAGTTCCTCGGGGCAGGGGT-TGACAGATTACTCAGCTGTATG 6561
|| || ||||||||||| || ||| | || |||| ||| || ||| | | |
Sbjct 734 ATGAAAAAGATGATGGAAAGCTCCAGTGCACAAGGGTCTGA-TGACTACGAATACATTTC 676
Query 6562 CATAGCCAATCATATCGACTACGAAAAATGGAACAATCACCAGCG 6606
||||| || || | |||||||| || || || || ||||||||
Sbjct 675 TATAGCAAACCACCTAGACTACGAGAAGTGTAATAACCACCAGCG 631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35696360740080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |