Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_025405.1
Length=11124
Score E
Sequences producing significant alignments: (Bits) Value
seq44943 78.8 7e-11
>seq44943
Length=2415
Score = 78.8 bits (86), Expect = 7e-11
Identities = 130/187 (70%), Gaps = 3/187 (2%)
Strand=Plus/Minus
Query 6286 ATCTTATAATTGGATTGAGAGCAAAGGAGAGAGAGTTGAAGAACAAAGGACGATTCTTTG 6345
||||||||||||| || | | || | || || | || ||| ||| |||| |||
Sbjct 904 ATCTTATAATTGGGTTAAAACAGAAACAAGGACAGATCAAACTCAAGGGAAGATTATTTT 845
Query 6346 CACTGATGTCTTGGAGACTTAGAGAATATTTTGTGGTCACAGAATATTTGATCAAAAAGC 6405
| |||||||||| ||| ||||| || ||| ||||| || |||||||| || || |
Sbjct 844 GTTTAATGTCTTGGACACTAAGAGACTACTTT---GTCACTGAGTATTTGATAAAGAATC 788
Query 6406 ATTACATCCCTTTGTTCAAAGGCTTGACCATGGCGGATGATCTAAATACAGTAATAGAAA 6465
| | | | || | || | || | || ||||| |||||| ||| || ||||| |||
Sbjct 787 ACTTCGTTCCCCTCTTTTACGGACTAACAATGGCAGATGATTTAACAACTGTAATGAAAA 728
Query 6466 AGATGAT 6472
|||||||
Sbjct 727 AGATGAT 721
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35447004109440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |