Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_025406.1
Length=11141
Score E
Sequences producing significant alignments: (Bits) Value
seq44943 96.9 2e-16
>seq44943
Length=2415
Score = 96.9 bits (106), Expect = 2e-16
Identities = 135/187 (72%), Gaps = 7/187 (4%)
Strand=Plus/Minus
Query 6313 ATAGGATTAAAAGGTAAGGAAAGAGAGCTGAAAC--AAGCAGGTAGATTCTTTTCATTGA 6370
|| || |||||| || || || || | |||| ||| || ||||| |||| || |
Sbjct 896 ATTGGGTTAAAACAGAAACAAGGACAGATCAAACTCAAG--GGAAGATTATTTTGTTTAA 839
Query 6371 TGTCATGGGAGTTACGAGAGTACTTTGTCATTACCGAATATTTAATAAAACACCATTTTG 6430
|||| ||| || |||| |||||||||| | || ||||| ||||| | || || |
Sbjct 838 TGTCTTGGACACTAAGAGACTACTTTGTCACT---GAGTATTTGATAAAGAATCACTTCG 782
Query 6431 TACCTCTATTTAAGGGATTAACAATGGCAGATGATATGACAGAAGTGATCAAAAAGATGC 6490
| || || ||| | ||| ||||||||||||||||| | ||| || || |||||||||
Sbjct 781 TTCCCCTCTTTTACGGACTAACAATGGCAGATGATTTAACAACTGTAATGAAAAAGATGA 722
Query 6491 TGGAAAG 6497
|||||||
Sbjct 721 TGGAAAG 715
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35501351067400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |