Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_028230.1
Length=12020
Score E
Sequences producing significant alignments: (Bits) Value
seq44943 93.3 3e-15
>seq44943
Length=2415
Score = 93.3 bits (102), Expect = 3e-15
Identities = 132/185 (71%), Gaps = 3/185 (2%)
Strand=Plus/Minus
Query 7191 ATAATCGGATTAAAAGCAAAAGAAAGGGAGATGAAAAGAATCGGAAGAtttttttCATTA 7250
||||| || |||||| ||| || | |||| ||| | |||||||| |||| |||
Sbjct 899 ATAATTGGGTTAAAACAGAAACAAGGACAGATCAAACTCAAGGGAAGATTATTTTGTTTA 840
Query 7251 ATGTCTTGGGAATTAAGAGAATATTTTGTTTCTACTGAATATCTGATaaaaaaaTATTAT 7310
||||||||| | ||||||| || ||||| ||||| ||| ||||||| || | |
Sbjct 839 ATGTCTTGGACACTAAGAGACTACTTTGT---CACTGAGTATTTGATAAAGAATCACTTC 783
Query 7311 GTTCCATTATTCAAGGGATTGACAATGGCAGATGGATTAATGACAGTGGTGAAGAAAATG 7370
||||| | || | ||| | ||||||||||||| |||| || || |||| || |||
Sbjct 782 GTTCCCCTCTTTTACGGACTAACAATGGCAGATGATTTAACAACTGTAATGAAAAAGATG 723
Query 7371 ATTGA 7375
|| ||
Sbjct 722 ATGGA 718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 38311408481920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |