Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_031215.1
Length=12291
Score E
Sequences producing significant alignments: (Bits) Value
seq44943 127 2e-25
>seq44943
Length=2415
Score = 127 bits (140), Expect = 2e-25
Identities = 193/274 (70%), Gaps = 3/274 (1%)
Strand=Plus/Minus
Query 7311 TCTGATTATCGGGTTGAAAGAGAAGGAGAGAGAGATCAAAATTAACGGTCGTTTTTTCTC 7370
||| || || ||||| ||| |||| | || |||||||| | || || | || || |
Sbjct 903 TCTTATAATTGGGTTAAAACAGAAACAAGGACAGATCAAACTCAAGGGAAGATTATTTTG 844
Query 7371 TCTGATGTCATGGGATTTGAGAGATTACTTTGTGATAACTGAATATCTAATCAAGACACA 7430
| | ||||| ||| | ||||| |||||||| | |||| ||| | || |||| ||
Sbjct 843 TTTAATGTCTTGGACACTAAGAGACTACTTTGTCA---CTGAGTATTTGATAAAGAATCA 787
Query 7431 TTTTGTCCCTCTTTTCTATGGTCTAACTATGGCCGATGATATGACGACCGTTGTGAGGAA 7490
|| || || || || || || ||||| ||||| |||||| | || || || ||| ||
Sbjct 786 CTTCGTTCCCCTCTTTTACGGACTAACAATGGCAGATGATTTAACAACTGTAATGAAAAA 727
Query 7491 GATGATGGAGAATACTAGCGGTCAGGGCTCTGATGATTATGAACACATCGGAATTGCAAA 7550
||||||||| | | || | || || |||||||| || ||| |||| || |||||
Sbjct 726 GATGATGGAAAGCTCCAGTGCACAAGGGTCTGATGACTACGAATACATTTCTATAGCAAA 667
Query 7551 CCACCTTGATTACGAAAAATGGAACAACCATCAG 7584
|||||| || ||||| || || || ||||| |||
Sbjct 666 CCACCTAGACTACGAGAAGTGTAATAACCACCAG 633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 39177762929400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |