Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_031216.1 Length=15462 Score E Sequences producing significant alignments: (Bits) Value seq631 95.1 1e-15 >seq631 Length=217192 Score = 95.1 bits (104), Expect = 1e-15 Identities = 124/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 11226 AATATCAGGATCAGTTGAACATAGATTAACTACCACTTCAATAGACAGAGGAGGCAAAGT 11285 ||| || ||||| | ||||| ||||| |||||| | | | |||||||||| ||||| Sbjct 166681 AATCTCTGGATCCGAGGAACACAGATTCGCTACCAATGCCGTTCACAGAGGAGGGAAAGT 166622 Query 11286 TGAACTACTGTTTACATTTGCTACATATCTTACTCTATCCACTGACACATTGATATCTTA 11345 | || | |||| | |||| || | | | || |||| || || || || || |||| Sbjct 166621 TAAATTCATGTTGAATTTTGGAACTTTTTTGACATTATCTACGGATACTTTCATCACTTA 166562 Query 11346 TGCCAAGGGAACAGTAAATGTGAATCTTCATTTTCAGGCATCATTGAGTTAC 11397 ||| || ||||| |||||| ||||| ||||||||||| ||||||||| Sbjct 166561 TGCAAAAGGAACTCAAAATGTCAATCTGCATTTTCAGGCCAGTTTGAGTTAC 166510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 49310535264250