Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_031268.1 Length=8683 Score E Sequences producing significant alignments: (Bits) Value seq19033 80.6 1e-11 >seq19033 Length=9472 Score = 80.6 bits (88), Expect = 1e-11 Identities = 72/88 (82%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 3900 AATCACTTAGACTATGAGAAATGGAACAATCATCAGAGGAAAAAGTCAACCTTCCCCG-T 3958 |||||| |||| |||||||| |||||||||||||| | ||||| |||||||| || | | Sbjct 6548 AATCACATAGAATATGAGAAGTGGAACAATCATCA-AAGAAAATATCAACCTTTCCAGAT 6606 Query 3959 CTTCAAGGTTATGGGTCAGTTCCTTGGG 3986 || || || ||||| |||||||| ||| Sbjct 6607 TTTTAAAGTAATGGGACAGTTCCTCGGG 6634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27643420322360