Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_031268.1
Length=8683
Score E
Sequences producing significant alignments: (Bits) Value
seq19033 80.6 1e-11
>seq19033
Length=9472
Score = 80.6 bits (88), Expect = 1e-11
Identities = 72/88 (82%), Gaps = 2/88 (2%)
Strand=Plus/Plus
Query 3900 AATCACTTAGACTATGAGAAATGGAACAATCATCAGAGGAAAAAGTCAACCTTCCCCG-T 3958
|||||| |||| |||||||| |||||||||||||| | ||||| |||||||| || | |
Sbjct 6548 AATCACATAGAATATGAGAAGTGGAACAATCATCA-AAGAAAATATCAACCTTTCCAGAT 6606
Query 3959 CTTCAAGGTTATGGGTCAGTTCCTTGGG 3986
|| || || ||||| |||||||| |||
Sbjct 6607 TTTTAAAGTAATGGGACAGTTCCTCGGG 6634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 27643420322360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |