Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_031301.1
Length=11103
Score E
Sequences producing significant alignments: (Bits) Value
seq19033 78.8 7e-11
>seq19033
Length=9472
Score = 78.8 bits (86), Expect = 7e-11
Identities = 102/138 (74%), Gaps = 6/138 (4%)
Strand=Plus/Plus
Query 6508 AAATCATATTGACTATGAGAAATGGAACAACCATCAAAGAAAAGCTGCAACTGATCCAG- 6566
|||||| || || |||||||| |||||||| |||||||||||| | |||| |||||
Sbjct 6547 AAATCACATAGAATATGAGAAGTGGAACAATCATCAAAGAAAATAT-CAACCTTTCCAGA 6605
Query 6567 TTTTCAAGGTCATGGGAGAGTTCTTAGGATATCCC----AACTTATTCACAAGAACTCAC 6622
|||| || || |||||| ||||| | || || ||| || | | |||||| ||
Sbjct 6606 TTTTTAAAGTAATGGGACAGTTCCTCGGGTACCCCTTGTAAATACATAGCAAGAATCCAT 6665
Query 6623 GAATTCTTTCAAGAAAGT 6640
|||| |||| || |||||
Sbjct 6666 GAATGCTTTGAAAAAAGT 6683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35379869631960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |