Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_031302.1
Length=11370
Score E
Sequences producing significant alignments: (Bits) Value
seq44943 98.7 7e-17
>seq44943
Length=2415
Score = 98.7 bits (108), Expect = 7e-17
Identities = 127/175 (73%), Gaps = 3/175 (2%)
Strand=Plus/Minus
Query 6418 ATCTTATTATAGGGTTAAAAGAAAAGGAGCGCGAACTGAAAATTGGAGGCAGATTCTTTG 6477
||||||| || ||||||||| | || | | | | ||| | || ||||| |||
Sbjct 904 ATCTTATAATTGGGTTAAAACAGAAACAAGGACAGATCAAACTCAAGGGAAGATTATTTT 845
Query 6478 CCTTGATGTCCTGGGAAATAAGGGATTATTTTGTAATGACTGAGTACTTGATTAAAACAC 6537
|| ||||| ||| | |||| || || ||||| | ||||||| ||||| || | |
Sbjct 844 GTTTAATGTCTTGGACACTAAGAGACTACTTTGTCA---CTGAGTATTTGATAAAGAATC 788
Query 6538 ACTTTGTTCCTCTATTTGATGGACTCACAATGGCAGATGACTTAACAACGGTAAT 6592
|||| ||||| || ||| | ||||| |||||||||||||| |||||||| |||||
Sbjct 787 ACTTCGTTCCCCTCTTTTACGGACTAACAATGGCAGATGATTTAACAACTGTAAT 733
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36233436559920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |