Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_031304.1
Length=10306
Score E
Sequences producing significant alignments: (Bits) Value
seq44943 87.8 1e-13
>seq44943
Length=2415
Score = 87.8 bits (96), Expect = 1e-13
Identities = 88/114 (77%), Gaps = 3/114 (3%)
Strand=Plus/Minus
Query 5345 GGAAGGTTCTTTTCTTTAATGACATGGGCTCTAAGGGAATATTTCGTCTCTACTGAGTAT 5404
||||| || |||| ||||||| | ||| | ||||| || || || ||| |||||||||
Sbjct 857 GGAAGATTATTTTGTTTAATGTCTTGGACACTAAGAGACTACTTTGTC---ACTGAGTAT 801
Query 5405 TTGATCAAAACTTACTTCGTTCCATTATTTGAGGGACTCACTATGGCTGATGAT 5458
||||| || | | |||||||||| | ||| | ||||| || ||||| ||||||
Sbjct 800 TTGATAAAGAATCACTTCGTTCCCCTCTTTTACGGACTAACAATGGCAGATGAT 747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 32831956367600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |