Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19] 86,670 sequences; 1,113,962,544 total letters Query= NC_031304.1 Length=10306 Score E Sequences producing significant alignments: (Bits) Value seq44943 87.8 1e-13 >seq44943 Length=2415 Score = 87.8 bits (96), Expect = 1e-13 Identities = 88/114 (77%), Gaps = 3/114 (3%) Strand=Plus/Minus Query 5345 GGAAGGTTCTTTTCTTTAATGACATGGGCTCTAAGGGAATATTTCGTCTCTACTGAGTAT 5404 ||||| || |||| ||||||| | ||| | ||||| || || || ||| ||||||||| Sbjct 857 GGAAGATTATTTTGTTTAATGTCTTGGACACTAAGAGACTACTTTGTC---ACTGAGTAT 801 Query 5405 TTGATCAAAACTTACTTCGTTCCATTATTTGAGGGACTCACTATGGCTGATGAT 5458 ||||| || | | |||||||||| | ||| | ||||| || ||||| |||||| Sbjct 800 TTGATAAAGAATCACTTCGTTCCCCTCTTTTACGGACTAACAATGGCAGATGAT 747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32831956367600