Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq161332 75.2 6e-11 seq160801 75.2 6e-11 >seq161332 Length=17527 Score = 75.2 bits (82), Expect = 6e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||| |||||||||||||||||||||||| | ||||| ||||||| ||||| || | Sbjct 12079 CTGCCCGGGCATAGTTCACCATCTTTCGGGTGCCAACGCGTGCGCTCTCGCTCCGCCCCG 12138 Query 897 CCGACG 902 ||||| Sbjct 12139 GCGACG 12144 >seq160801 Length=12435 Score = 75.2 bits (82), Expect = 6e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||| |||||||||||||||||||||||| | |||| |||||||| ||||| || | Sbjct 4710 CTGCCCGGGCATAGTTCACCATCTTTCGGGTGCCAACGTGTGCGCTCGCGCTCCGCCCCG 4651 Query 897 CCGACG 902 ||||| Sbjct 4650 GCGACG 4645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2855044631832