Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhipicephalus_20microplus_20[genbank_20GCA_5F002176555.1_202017-06- 07] 195,084 sequences; 2,008,371,944 total letters Query= NC_031285.1 Length=5147 Score E Sequences producing significant alignments: (Bits) Value seq11982 140 1e-29 >seq11982 Length=71627 Score = 140 bits (154), Expect = 1e-29 Identities = 106/125 (85%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 4639 GCGTGTACGCTACTTCGGAGCCCCACTGCGAGGGTGTGACGTGCGACCCCGAGACTTGTC 4698 |||||| || || || | || |||||||||| |||||||| ||||||||||| || | Sbjct 2443 GCGTGTCTGCCACCTCAGCACCAAACTGCGAGGGCGTGACGTGTGACCCCGAGACGTGCC 2384 Query 4699 CTAAGCACGAATGCCATTGCGGGAGCCACAAGGACGCCTGCGGTTGCTGCGACTTCTGCG 4758 | |||||||||||||| |||||||| |||||||||||||| || ||||||||||||||| Sbjct 2383 CCAAGCACGAATGCCAGTGCGGGAGTCACAAGGACGCCTGTGGCTGCTGCGACTTCTGCA 2324 Query 4759 ACAAG 4763 ||||| Sbjct 2323 ACAAG 2319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16323495570720