Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq11968 77.0 2e-11 seq11967 77.0 2e-11 seq3198 77.0 2e-11 >seq11968 Length=1024 Score = 77.0 bits (84), Expect = 2e-11 Identities = 56/65 (86%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||| |||||||||||||||||||||||||| |||| || |||| |||||| |||| Sbjct 372 CTGCCCGGGCATAGTTCACCATCTTTCGGGTCCCAACGTGTGTGCTCTTGCTCCGCCTCA 313 Query 897 CCGAC 901 |||| Sbjct 312 TCGAC 308 >seq11967 Length=1154 Score = 77.0 bits (84), Expect = 2e-11 Identities = 56/65 (86%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||| |||||||||||||||||||||||||| |||| || |||| |||||| |||| Sbjct 757 CTGCCCGGGCATAGTTCACCATCTTTCGGGTCCCAACGTGTGTGCTCTTGCTCCGCCTCA 816 Query 897 CCGAC 901 |||| Sbjct 817 TCGAC 821 >seq3198 Length=1009 Score = 77.0 bits (84), Expect = 2e-11 Identities = 56/65 (86%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||| |||||||||||||||||||||||||| |||| || |||| |||||| |||| Sbjct 975 CTGCCCGGGCATAGTTCACCATCTTTCGGGTCCCAACGTGTGTGCTCTTGCTCCGCCTCA 916 Query 897 CCGAC 901 |||| Sbjct 915 TCGAC 911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860365170022