Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= NC_004119.1 Length=10690 Score E Sequences producing significant alignments: (Bits) Value seq151535 91.5 1e-14 >seq151535 Length=2368 Score = 91.5 bits (100), Expect = 1e-14 Identities = 113/154 (73%), Gaps = 3/154 (2%) Strand=Plus/Plus Query 8835 AAGATTCTGGAATATGGTAGACAAAGAAAGACAGTTACATCTCACTGGTGACTGTGAAAT 8894 || ||| |||||| |||| || |||||| | || |||||||| | ||| || |||||||| Sbjct 1772 AAAATTTTGGAATTTGGTGGAAAAAGAACGTCACTTACATCTAAATGGAGAATGTGAAAT 1831 Query 8895 GTGTGTCTACAACCTCATGGGCAAGAGAGAAAAGAAACCAGGAGACTTTGGAGTAGCAAA 8954 |||| | ||||| |||| ||| | ||||||| || | ||||| | | || Sbjct 1832 GTGTATTTACAATACGATGG---AGAAAAAAAAGAAGCCCACACGATTTGGGATCCCTAA 1888 Query 8955 AGGAAGTAGGACTATCTGGTACATGTGGTTGGGA 8988 ||| |||||||| || ||||| | ||||||||| Sbjct 1889 AGGTAGTAGGACGATTTGGTATTTATGGTTGGGA 1922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34021129433984