Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vollenhovia_20emeryi_20[refseq_20GCF_5F000949405.1_202015-03-06] 13,258 sequences; 287,900,827 total letters Query= NC_028265.1 Length=12004 Score E Sequences producing significant alignments: (Bits) Value seq13101 123 2e-24 >seq13101 Length=323720 Score = 123 bits (136), Expect = 2e-24 Identities = 377/569 (66%), Gaps = 24/569 (4%) Strand=Plus/Plus Query 1931 ACTGTCGATGATACGATGGTTCCTACTCTAGACAAGATATATGGAACAAATATCTTTTCA 1990 || || ||||| | ||| || ||||||||| | |||| |||||| | || || || Sbjct 297268 ACAGTGGATGAACCAATGTATCATACTCTAGATGATATATTTGGAACCAGAATTTTCTCT 297327 Query 1991 AAGACCCACTTAGCCTATAACAAGACTCTTTAC-TATGTGCCTGATGAATCTGGAACTTA 2049 || || || |||| ||| | || | ||||| ||||| ||||||||| | ||||| Sbjct 297328 AAAACACATATAGCATATGAAAAAAG-CTTTATATATGTTCCTGATGAAAAGGACACTTA 297386 Query 2050 CTACTGGTACGGACAAGATGGGGGTATTGAAGGACTCAATCAAGATACATGGGTTGTAGT 2109 || ||| | ||||| ||| ||||| ||||| | ||||||||||||||||| || Sbjct 297387 TTATTGGAATGGACAGTGTGGAGGTATCGAAGGGTTAAATCAAGATACATGGGTAGTTAC 297446 Query 2110 ATACATTAGTCAGATCAAGACTGCGTT-----CAGTGGGATGGCTATAAGATATACAGTA 2164 |||| | | || || ||| |||| | || ||||| || || ||| || Sbjct 297447 ATACTTGGGGCAAATTAAGTCTGCCATGAAACCATTGGGA----TACAA-CTATTATGTT 297501 Query 2165 TTGTGCAAAGGCGATGATTGTAGAGTTGTTCTTAGTATCCCTTACAGAGAAATAGT-GGA 2223 | || ||||| |||||| ||| ||| || || || || | | |||| | Sbjct 297502 CTCTGTAAAGGAGATGATGTAAGAATTGCGATTTTAATACC--AC-CAATATTAGTATCA 297558 Query 2224 C-GGAGATGTAGCAGGATTTAAGAACAAG-ATCGTGCAACGTCTGTCGGAAACCGCA--- 2278 | | || ||| ||| |||||| || ||| ||| ||| || || | || Sbjct 297559 CAAAACCAGTTGCACTCAATAAAAACAAGTATAGTGAAACATCT-TC--AAGACTCATTG 297615 Query 2279 AGTTCCCTCGGACATAAGATCAAAATTCTGGATAGTTATGGCTCTGAACGTTACTTTAAC 2338 | || | ||||| ||||| || || || |||||||| |||||| |||||||| Sbjct 297616 AAATCATTTGGACACAAGATTAAGATAGCAGAAAGTTATGGTTCTGAATTATACTTTAAT 297675 Query 2339 TTCTCAAAGACAGCCTCTGTTGGATATGTAGAGCTTCCGCAAACTTTCAGGAAGATTCAG 2398 ||||| || |||| || | || ||||||| || ||| | ||| || ||||| Sbjct 297676 TTCTCTAAATCAGCTTCAATAGGTACAATAGAGCTACCTCAAGTCTACAGAAAAATTCAA 297735 Query 2399 AAATGTTATGGTGCGAATAACGCATTCATCCCTACTATGGACGAATACATTGCTAGCACT 2458 |||| ||||||| ||||| || || || | || | || ||||| ||||| ||| | Sbjct 297736 AAATCACATGGTGCAAATAATGCCTTTATTTCAACGCTAGATGAATATATTGCAAGCGCA 297795 Query 2459 TTCAGTAACGCGCATAGTGCATCTAAAGT 2487 |||||||| || |||||| | |||||| Sbjct 297796 TTCAGTAATGCTCATAGTAGTTGTAAAGT 297824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38291887817216