Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongyloides_20ratti_20[genbank_20GCA_5F001040885.1_202014-09-18]
135 sequences; 43,150,242 total letters
Query= NC_014791.1
Length=9070
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 6e-17
>seq1
Length=11693564
Score = 98.7 bits (108), Expect = 6e-17
Identities = 103/133 (77%), Gaps = 2/133 (2%)
Strand=Plus/Minus
Query 7311 CCTGTTTTAGTCGAAGATACATGTCTCTGCTTTAATGCTTTCAATGGACTTCCTGGGCCA 7370
|| ||| | || |||||||||| | || ||||||||| | |||| | ||||| |||
Sbjct 8902278 CCCGTTATTGTTGAAGATACATCCTTATGTTTTAATGCTATGGGTGGATTACCTGGACCA 8902219
Query 7371 TACATAAAATGGTTTTTAAAAGAATTGGGTCTTGAAGGTGTTGTTAAAATGCTGTCA-GC 7429
||||| ||||||||||||||||||||| | || ||| | |||||||||| ||| |
Sbjct 8902218 TACATCAAATGGTTTTTAAAAGAATTGAAACCAGAGGGTTTATTTAAAATGCT-TCATGG 8902160
Query 7430 ATTTGGAGATAAA 7442
||||| |||||||
Sbjct 8902159 ATTTGAAGATAAA 8902147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 28908756094760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |