Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20murrelli_20[genbank_20GCA_5F001447425.1_202015-11-24]
5,242 sequences; 49,016,728 total letters
Query= NC_001430.1
Length=7390
Score E
Sequences producing significant alignments: (Bits) Value
seq643 419 1e-113
seq906 145 4e-31
seq1144 136 2e-28
seq945 127 1e-25
seq4341 82.4 4e-12
seq3031 78.8 4e-11
>seq643
Length=7254
Score = 419 bits (464), Expect = 1e-113
Identities = 832/1202 (69%), Gaps = 61/1202 (5%)
Strand=Plus/Minus
Query 131 TCAACAGGAGGGGGTACAAACCAGTACCACCACGAACACACACTTCTGTTTCCCCGG--T 188
|||| || ||| | || |||||| ||| || || ||||||||||||||||| |
Sbjct 7247 TCAATAGCAGGTGTGGCACACCAGTCATACCTTGATCAAGCACTTCTGTTTCCCCGGACT 7188
Query 189 GAAGTTGCATAGACTGTACCCACGGTTGAAAGCGATGAA-TCCGTTACCCGCTTAGGTAC 247
|| | |||| ||| | | ||| |||| | || | | ||||||||| | |||
Sbjct 7187 GAGTATCAATAGGCTGCTCGCGCGGCTGAAGGAGAAAACGTTCGTTACCCGACCAACTAC 7128
Query 248 TTCGAGAAGCCTAGTATCATCTTGGAATCTTCGATGCGTTGCGATCAGCACTCTACCCCG 307
|||||||||| ||||| || | || | | | ||| || ||||||| |||||
Sbjct 7127 TTCGAGAAGCTTAGTACCACCATGAACGAGGCAGGGTGTTTCGCTCAGCACA--ACCCC- 7071
Query 308 AGTGTAGCTTGGGTCGATGAGTCTGGACACCCCACACCGGCGACG-TGGTCCAGGCTGCG 366
||||||| | || |||||||| || ||| || |||||| ||| |||||||
Sbjct 7070 AGTGTAGATCAGGCTGATGAGTCACTGCAACCCCCATGGGCGACCATGGCAGTGGCTGCG 7011
Query 367 TTGGCGGCCTACCCATGGCTAGCACCATGGGACGCT--AGTTGTGAACAAGGTGCGAAGA 424
|||||||||| ||||||| | |||||||||||| | || ||| || |||| |||||
Sbjct 7010 TTGGCGGCCTGCCCATGGAGAAATCCATGGGACGCTCTAATTCTGA-CATGGTGTGAAGA 6952
Query 425 GCCTATTGAGCTACCTGAGAGTCCTCCGGCCCCTGAATGCGGCTAATCCCAACCACGGAG 484
||||||||||||| ||| |||||||||||||||||||||||||||||| ||| |||||
Sbjct 6951 GCCTATTGAGCTAGCTGGTAGTCCTCCGGCCCCTGAATGCGGCTAATCCTAACTGCGGAG 6892
Query 485 CAAATGCTCACAATCCAGTGAGTGGTTTGTCGTAATGCGCAAGTCTGTGGCGGAACCGAC 544
|| |||||||| | |||||| ||||| |||||||| | |||| |||| |||||||||||
Sbjct 6891 CACATGCTCACGAACCAGTGGGTGGTGTGTCGTAACGGGCAACTCTGCAGCGGAACCGAC 6832
Query 545 TACTTTGGGTGTCCGTGTTTCCTTTTATTTTTATTATGGCTGCTTATGGTGACAATCTGA 604
||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |
Sbjct 6831 TACTTTGGGTGTCCGTGTTTCCTTTTATTCTTATATTGGCTGCTTATGGTGACAATCAAA 6772
Query 605 GA-TTGTTATCATATAGCTATTGGATTAGCCATCCG--GTGATATCTTGAAATTTTGCCA 661
|| |||||| ||||||||||||||||| |||||||| ||| | | |||| |
Sbjct 6771 GAGTTGTTACCATATAGCTATTGGATTGGCCATCCGGTGTGCAACAGGGCAATTGT---- 6716
Query 662 TAACTTTTTCACAAATCCTACAACATTA-CACTACACTTT-------CTCTTGAA-TAAT 712
| || | || | | | | ||||| |||| | | | |||| || | ||
Sbjct 6715 TTACCTATTTATTGGTTTTGTACCATTATCACTGAAGTCTGTGATCACTCTCAAATTCAT 6656
Query 713 TGAGA----CAAC----TCATA-ATGGGAGCACAAGTTTCTAGACAACAAACTGGCACGC 763
| || |||| ||| | ||||| |||| || || | ||||| | || | |
Sbjct 6655 TTTGACCCTCAACACAATCAAACATGGGCTCACAGGTGTCCACACAACGCTCCGGTTCAC 6596
Query 764 ATGAGAATGCTAACGTTGCCACTGGAGGCTCAAGCATAACTTACAATCAAATAAATTTCT 823
| || || ||||| || || | || || | |||| || | | || |||| ||
Sbjct 6595 ACGAAAACTCTAACTCAGCTACCGAGGGTTCCACTATAAACTATACTACCATTAATTACT 6536
Query 824 ACAAAGATAGTTATGCAGCCTCAGCTAGTAAACA-AGATTTCAGCCAAGACCCATCCAAG 882
| |||||| ||||| ||| |||| |||| || || || || || |||||| ||||
Sbjct 6535 ATAAAGATTCCTATGCCGCCACAGCAGGTAAGCAGAGCCTTAAG-CAGGACCCAGACAAG 6477
Query 883 TTCACAGAGCCTGT---AG-CTGAAGCCCTAAAAGCTGG-AGCCCCAGTCCTAAAATCAC 937
|| || | ||||| || | | || ||| ||| ||| ||| ||||||| |
Sbjct 6476 TTTGCAAATCCTGTCAAAGACATCTTCACTGAAA--TGGCAGCGCCA---TTAAAATCTC 6422
Query 938 CATCAGCAGAGGCTTGTGGTTATAGTGACAGGGTCTTACAGCTCAAATTAGGAAATTCCA 997
|||| || ||||| |||||||| ||||| |||| ||| | | | || ||||| |
Sbjct 6421 CATCTGCTGAGGCATGTGGTTACAGTGATCGGGTGGCACAATTAACTATTGGCAATTCTA 6362
Query 998 GTATAGTTACCCAAGAAGCAGCTAACAT--TTGTTGTGCCTATGGAGAGTGGCCCACCTA 1055
|| ||| ||||||||||| ||||| | || || |||||| |||||||| ||||
Sbjct 6361 CCATCACTACGCAAGAAGCAGCAAACATCATAGT--TGGCTATGGTGAGTGGCCTTCCTA 6304
Query 1056 TCTACCTGATAATGAGGCAGTGGCTATTGATAAACCTACCCAGCCAGAAACATCCACAGA 1115
| || ||| || || | || ||||| || | ||||| || |
Sbjct 6303 CTGTTCGGACTCTGATGCCACTGCAGTGGACAAACCAACGCGCCCAGATGTTTCGGTGAA 6244
Query 1116 TAGATTTTACACTTTAAAATCCAAGAAATGGGA-AAG-CAACAGTACTGGGTGGTGGTGG 1173
||| |||||||| || | | || ||||| ||| || | | ||||||| |||
Sbjct 6243 TAGGTTTTACACATTGGACACAAAATTGTGGGAGAAGTCATC--CAAGGGGTGGTACTGG 6186
Query 1174 AAGCTCCCTGATGCTTTGAATCAAATTGGTATGTTTGGTCAAAACGTCCAATACCACTAC 1233
|| |||| |||| || | | ||| || | ||||||||||| | || | |||||||
Sbjct 6185 AAATTCCCGGATGTGTTAACTGAAACCGGGGTCTTTGGTCAAAATGCACAGTTCCACTAC 6126
Query 1234 CTGTATAGGAGTGGGTTCCTGTGC---CACGTACAATGCAATGCTACAAAATTTCACCAA 1290
|| ||| || |||||| ||| ||||| || |||||||||| || || ||||||
Sbjct 6125 CTCTATCGGTCAGGGTTC---TGCATTCACGTGCAGTGCAATGCTAGTAAGTTCCACCAA 6069
Query 1291 GG 1292
||
Sbjct 6068 GG 6067
Score = 149 bits (164), Expect = 3e-32
Identities = 246/351 (70%), Gaps = 18/351 (5%)
Strand=Plus/Minus
Query 4354 GAAGCTAAGAGGGTTTCTGCCTTAGAAAGGAAAATTAACAACTACATACAGTTCAAGTCC 4413
||||| |||||||| | ||| |||||| || ||| || || ||||| ||||||||| |
Sbjct 2976 GAAGCAAAGAGGGTGTACGCCCTAGAAAAGAGAATGAATAATTACATGCAGTTCAAGAGC 2917
Query 4414 AAATCTCGCATTGAACCAGTATGTTTGATAATACATGGATCTCCAGGCACTGGGAAGTCA 4473
||| || |||||||| ||||| | || || || || || || ||||||||||||
Sbjct 2916 AAACACCGTATTGAACCTGTATGCCTAATTATCAGAGGCTCGCCTGGTACTGGGAAGTCA 2857
Query 4474 GTGGCATCTAACCTCATTGCCAGAGCTATTACAGAAAA-----ACT-GGGTGGGGATTCT 4527
||||| | | ||||| ||||| || |||| || ||| ||| | ||||
Sbjct 2856 TTGGCAACAGGGATTATTGCTAGAGCCATAGCAGACAAGTACCACTCCAGTGTGTATTCC 2797
Query 4528 TACTCACTCCCACCTGATCCAAAATATTTTGATGGGTATAAACAACAGACAGTGGTC-CT 4586
| | || || || ||| | | ||||| || || |||||||||| | ||| ||
Sbjct 2796 T------TACCTCCAGACCCAGACCACTTTGACGGATACAAACAACAGA---TCGTCACT 2746
Query 4587 G--ATGGATGACTTAATGCAAAATCCAGATGGTAATGATATTGCTATGTTTTGTCAGATG 4644
| ||||| ||| || ||||| ||||| || || || || | | ||||||||||||
Sbjct 2745 GTTATGGACGACCTATGCCAAAACCCAGACGGGAAAGACATGTCACTATTTTGTCAGATG 2686
Query 4645 GTATCTACTGTAGACTTTATACCACCAATGGCCAGTCTTGAGGAAAAGGGA 4695
|| || || || || |||||||| || ||||| ||| ||||| ||||||
Sbjct 2685 GTCTCCACAGTGGATTTTATACCGCCTATGGCATCTCTGGAGGAGAAGGGA 2635
Score = 140 bits (154), Expect = 2e-29
Identities = 277/408 (68%), Gaps = 4/408 (1%)
Strand=Plus/Minus
Query 6864 CAAAGGTATTGATTTAGATCAGTTCAAAATGATAGCATATGGTGATGATGTAATTGCTAG 6923
|||||| || ||| ||||| | | || ||| | || || || |||||||| | |||||
Sbjct 463 CAAAGGGATAGATCTAGATGAACTGAACATGGTGGCCTACGGGGATGATGTGTTGGCTAG 404
Query 6924 TTACCCACATGAGATAGAC--CCTGGCCTATTGGCAAAAGCCGGGAAAGAGTATGGATTA 6981
|||||| || ||| |||| ||||||| | | || || |||||||| ||
Sbjct 403 TTACCCCTTCCCAATTGACTGTCTGG--AGTTGGCAAGAACAGGCAAGGAGTATGGTCTA 346
Query 6982 ATAATGACCCCAGCAGACAAGAGTAGTGGTTTTACTGAGACTACTTGGGAGAATGTTACC 7041
| |||||||| || |||||| | |||| |||| ||| |||||||||| ||
Sbjct 345 ACTATGACCCCTGCCGACAAGTCACCCTGCTTTAATGAGGTTACATGGGAGAATGCCACT 286
Query 7042 TTTTTGAAGAGGTATTTCAGAGCAGATGAACAGTATCCCTTTTTGATCCACCCAGTTATG 7101
|| |||||||| ||| | ||| | || | || ||| | |||||||| |||
Sbjct 285 TTCTTGAAGAGAGGATTCTTGCCTGATCATCAATTCCCGTTTCTCATCCACCCTACGATG 226
Query 7102 CCAATGAAGGAAATCCATGAGTCAATTAGATGGACAAAAGATCCGAGAAACACACAAGAT 7161
||||||| ||| || || || || ||| | ||||| |||||| | ||| || ||||||
Sbjct 225 CCAATGAGGGAGATTCACGAATCCATTCGTTGGACCAAAGATGCACGAAGTACTCAAGAT 166
Query 7162 CATGTGAGATCCTTGTGCCTACTKGCCTGGCACAATGGTGAAGAAACTTACAATGAATTC 7221
|| ||| | ||| | ||| || | || |||||||| || |||| || | ||||
Sbjct 165 CACGTGCGCTCCCTCTGCTTATTAGCATGGCACAACGGGAAAGAGGAGTATGAAAAATTT 106
Query 7222 TGCAGGAAAATCAGAACTGTACCTGTAGGAAGAGCTTTAGCTTTACCA 7269
|| ||||||| | || || | |||| ||| || ||| |||||
Sbjct 105 GTGAGTGCAATCAGATCAGTTCCAATTGGAAAAGCATTGGCTATACCA 58
Score = 116 bits (128), Expect = 2e-22
Identities = 599/937 (64%), Gaps = 40/937 (4%)
Strand=Plus/Minus
Query 5752 TATGGTTTCCTTAATCTTGGGGGGACCCCCACCCACAGAATATTAATGTATAACTTCCCC 5811
||||| || | || ||| | || | ||||| ||||| | | ||||| || |||||
Sbjct 1590 TATGGGTTTTTGAACCTTAGTGGTAAGCCCACTCACAGGACTATGATGTACAATTTCCCA 1531
Query 5812 ACAAGAGCAGGACAATGTGGAGGGGTGGTGACCACCACTGGTAAAGTGATTGGCATTCAC 5871
|||| ||||||||| ||||| || || ||||| || |||||||||||||| || |||
Sbjct 1530 ACAAAAGCAGGACAGTGTGGTGGTGTTGTGACTGCCGTGGGTAAAGTGATTGGGATCCAC 1471
Query 5872 GTTGGTGGCAATGGTGCGCAAGGCTTT---GCTGCCATGCTATTGCAAAATTACTTTACT 5928
|||||||||| ||| |||||| || |||||| || | | | | ||| |
Sbjct 1470 ATTGGTGGCAACGGTAGGCAAGGTTTCTGCGCTGCCCTGAAGAGGGGATACT--TTTGCA 1413
Query 5929 GAGAAGCAGGGTGAGATAGTATCCATTGAGA---------AAACTGGAGTCTTTA---TA 5976
| ||| || |||||||| || || || ||||||| || | |
Sbjct 1412 GTGAA-CAAGGTGAGATCCAATGGATGAAGCCCAACAAAGAAACTGGCAGGTTGAACATC 1354
Query 5977 AATGCGCCAGCTAAAACCAAATTAGAACCTAGTGTCTTCCATGAAGTATTTGAGGGAGTT 6036
|| | || || || || | ||||| |||||||| || || || || || || |
Sbjct 1353 AACGGACCTACTCGCACAAAGCTTGAACCAAGTGTCTTTCACGATGTGTTCGAAGGCACT 1294
Query 6037 AAGGAACCTGCAGTTTTACATAGCAAGGACAAGAGACTGAAGGTAGATTTTGAGGAAGCA 6096
|| || || ||||| | ||| || ||| || ||| | || || ||||| | ||
Sbjct 1293 AAAGAGCCAGCAGTGCTGACTAGTAAAGACCCAAGGCTGGAAGTTGACTTTGAACAGGCT 1234
Query 6097 ATATTTTCCAAATACGTTGGTAACAAAAC-CATGCTAATGGATGAGTACATGGAGGAGGC 6155
| ||||| |||||||| || |||| |||| | || |||| | |||||||
Sbjct 1233 CTTTTTTCAAAATACGTGGGGAACACGCTTCATGA-ACCCGACGAGTTTGTCAAGGAGGC 1175
Query 6156 AGTGGACCACTATGTAGGTTGTTTAGAGCCCCTTGATATTAGCACCGAACCCA--TTAAA 6213
| || |||| | ||| | ||||| | ||| ||| | | |
Sbjct 1174 GGCCTTACATTATGCCAACCAACTCAAGCAGTTAGATATCAAGACC--ACCAAGATGAGC 1117
Query 6214 TTAGAAGAAGCCATGT-ATGGTATGGATGGCCTTGAAGCCTTGGACCT-CACTACCAGTG 6271
| || || || |||| | || | || ||| ||||| | || || ||| || ||||
Sbjct 1116 ATGGAGGATGC-ATGTTACGGCACAGAGAACCTGGAAGCTATAGATCTTCAC-ACAAGTG 1059
Query 6272 CTGGCTACCCATACTTGTTGCAG--GGGAAGAAGAAAAGAGACATCTTCAACAGACAAAC 6329
| || || |||||| |||| || | ||||||| ||||| || | | |||
Sbjct 1058 CAGGATATCCATACAG--TGCACTAGGCATCAAGAAAAAGGACATTTTGGATCCAACAAC 1001
Query 6330 TAGAGATA-CAACAGAGATGACCAAAATGT---TGGACAAATATGGTGTGGATTTGCCCT 6385
| | ||| || || |||||| || | | ||||||| ||||| ||||| | || |
Sbjct 1000 TCGCGATGTCAGCA-AGATGA---AATTCTACATGGACAAGTATGGGTTGGATCTACCGT 945
Query 6386 TTGTCACATTTGTCAAAGATGAACTCAGAAGCAGAGAGAAAGTAGAGAAGGGCAAGTCTA 6445
|| | ||| ||||||||||| || || || || | |||| || ||||||
Sbjct 944 ACTCTACTTATGTTAAAGATGAACTTAGGGCCATCGACAAGATCAAGAAAGGGAAGTCTC 885
Query 6446 GATTGATTGAAGCTAGTTCTTTAAATGATTCAGTTGCCATGCGAGTGGCATTTGGAAACC 6505
| | || ||||| || ||||||| ||||| | || || || ||||||| |||
Sbjct 884 GTCTCATAGAAGCGAGCAGCCTAAATGACTCAGTGTACTTGAGAATGACATTTGGGCACC 825
Query 6506 TTTATGCAACATTCCACAAAAATCCAGGAGTCGCCACTGGGAGCGCTGTTGGATGTGATC 6565
|||||| | | |||||| |||||||| ||| || |||||||| || | |
Sbjct 824 TTTATGAAGCTTTCCACGCCAATCCAGGTACAATCACCGGTTCAGCTGTTGGGTGCAACC 765
Query 6566 CAGATTTGTTTTGGTCCAAAATCCCAGTTATSTTAGATGGAAAAATTTTTGCATTTGACT 6625
||||| |||| ||| ||| | ||| || | | ||| |||| || |||||||
Sbjct 764 CAGATGTGTTCTGGAGCAAGTTACCAATTCTACTCCCAGGATCGCTTTTCGCGTTTGACT 705
Query 6626 ACACAGGTTATGATGCCAGTCTCTCACCAGTCTGGTT 6662
|| | || ||||| || |||||| ||||| |||||
Sbjct 704 ACTCGGGGTATGACGCTAGTCTCAGCCCAGTGTGGTT 668
Score = 95.1 bits (104), Expect = 6e-16
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 1991 GCAGGTATTACACCCACTGGTCTGGTTCACTGGAGATGACTTTCATGTTTTGTGGGAGCT 2050
|| |||| |||||||| ||||| || |||||||| | || |||||||| ||| ||
Sbjct 5350 GCGGGTACTACACCCAATGGTCAGGATCACTGGAAGTCACCTTCATGTTCACCGGGTCCT 5291
Query 2051 TTATGACCACAGGTAAATTGATCATTTGCTACACACCACCTGGTGG-ATCTAGCCCAACA 2109
||||| | || || || || |||| ||||||||||| || || || |||||
Sbjct 5290 TTATGGCTACCGGCAAGATGCTCATAGCATACACACCACCAGGAGGCCCCTTACCCAA-G 5232
Query 2110 GATAGGATGCAAGCCATGCTAGCTACTCATGTGGTGTGGGACTTTGGGCTGCAATCTAGT 2169
|| || | |||||| | | || || || | |||||||||||||||||||| |
Sbjct 5231 GACCGGGCGACCGCCATGTTGGGCACGCACGTCATCTGGGACTTTGGGCTGCAATCGTCT 5172
Query 2170 ATCACCATTATAATTCCTTGGATC 2193
||||| || |||| || ||||||
Sbjct 5171 GTCACCCTTGTAATACCATGGATC 5148
>seq906
Length=2416
Score = 145 bits (160), Expect = 4e-31
Identities = 292/428 (68%), Gaps = 24/428 (6%)
Strand=Plus/Plus
Query 4354 GAAGCTAAGAGGGTTTCTGCCTTAGAAAGGAAAATTAACAACTACATACAGTTCAAGTCC 4413
||||||||| | || | || |||| | || ||| ||||||||||| ||||||||| |
Sbjct 1092 GAAGCTAAGCGAGTCTATGTTCTAGAGAAGAGAATGAACAACTACATGCAGTTCAAGAGC 1151
Query 4414 AAATCTCGCATTGAACCAGTATGTTTGATAATACATGGATCTCCAGGCACTGGGAAGTCA 4473
||| || |||||||| |||||| | || || || || ||||||||||| |||||
Sbjct 1152 AAACACCGTATTGAACCTGTATGTCTCATCATTAGAGGCTCACCAGGCACTGGAAAGTCC 1211
Query 4474 GTGGCATCTAACCTCATTGCCAGAGCTATTACAGAAAA-----ACTGG-GTGGGGATTCT 4527
| || | ||||||| | | || |||| || ||| ||| |
Sbjct 1212 CTTGCGACCGGTATCATTGCTCGGGTCATAGCAGACAAGTATCACTCTAGTGTG------ 1265
Query 4528 TACTCACTCCCACCTGATCCAAAATATTTTGATGGGTATAAACAACAGACAGTGGTCC-- 4585
|||||||| ||||| || || | ||||||| ||||||||||| || |||||||
Sbjct 1266 TACTCACTTCCACCAGACCCTGACCATTTTGACGGGTATAAACAGCA---AGTGGTCACA 1322
Query 4586 -TGATGGATGACTTAATGCAAAATCCAGATGGTAATGATATTGCTATGTTTTGTCAGATG 4644
| |||||||| | ||||| || || || || || || | | ||||| ||||||
Sbjct 1323 GTTATGGATGATCTGTGTCAAAACCCTGACGGCAAAGACATGTCATTATTTTGCCAGATG 1382
Query 4645 GTATCTACTGTAGACTTTATACCACCAATGGCCAGTCTTGAGGAAAAGGGA--ACCCTGT 4702
|| || || || || ||||| ||||||||||| ||| || ||||||||| |||
Sbjct 1383 GTGTCCACCGTGGATTTTATCCCACCAATGGCTTCTCTCGAAGAAAAGGGAGTTTCCTTC 1442
Query 4703 ACA-CTAGCCCATTTCTGATTGCGACCACCAATGCTGGCTCAATTCACGCACCTACAGTT 4761
||| ||| |||| | || || ||||||| ||| || ||| | ||||||||
Sbjct 1443 ACATCTA---AATTTGTTATCGCATCCACCAACGCTAGCAACATTATAGTGCCTACAGTG 1499
Query 4762 TCAGATTC 4769
||||| ||
Sbjct 1500 TCAGACTC 1507
>seq1144
Length=1302
Score = 136 bits (150), Expect = 2e-28
Identities = 225/324 (69%), Gaps = 6/324 (2%)
Strand=Plus/Plus
Query 6880 GATCAGTTCAAAATGATAGCATATGGTGATGATGTAATTGCTAGTTACCCACATGAGATA 6939
||| |||| || ||| | || ||||| || ||||| | ||||||||||| | ||
Sbjct 867 GATGAGTTGAACATGGTGGCCTATGGGGACGATGTGCTGGCTAGTTACCCCTTTCCCATT 926
Query 6940 GACCCTGGCCTA---TTGGCAAAAGCCGGGAAAGAGTATGGATTAATAATGACCCCAGCA 6996
|| | |||| ||||| || | || ||||||||||| || | ||||| || |||
Sbjct 927 GA---TTGCCTTGAGTTGGCTAAGACTGGCAAAGAGTATGGTTTGACCATGACTCCTGCA 983
Query 6997 GACAAGAGTAGTGGTTTTACTGAGACTACTTGGGAGAATGTTACCTTTTTGAAGAGGTAT 7056
||||| |||| | ||| || ||||| |||| |||||| |||||||
Sbjct 984 GACAAATCACCCTGTTTCAATGAAGTAACATGGGAAAATGCTACCTTCCTGAAGAGAGGA 1043
Query 7057 TTCAGAGCAGATGAACAGTATCCCTTTTTGATCCACCCAGTTATGCCAATGAAGGAAATC 7116
||| |||| | || | ||| || || || ||||| ||||| |||| || |||
Sbjct 1044 TTCTTGCCAGACCACCAATTTCCATTCTTAATTCACCCTACGATGCCCATGAGAGAGATC 1103
Query 7117 CATGAGTCAATTAGATGGACAAAAGATCCGAGAAACACACAAGATCATGTGAGATCCTTG 7176
||||| || ||| ||||||| ||||| || | ||||| |||||||| ||| | ||| ||
Sbjct 1104 CATGAATCCATTCGATGGACTAAAGACGCGCGCAACACCCAAGATCACGTGCGCTCCCTG 1163
Query 7177 TGCCTACTKGCCTGGCACAATGGT 7200
|| || | || ||||||||||||
Sbjct 1164 TGTCTGTTGGCATGGCACAATGGT 1187
>seq945
Length=2018
Score = 127 bits (140), Expect = 1e-25
Identities = 87/97 (90%), Gaps = 1/97 (1%)
Strand=Plus/Minus
Query 547 CTTTGGGTGTCCGTGTTTCCTTTTATTTTTATTATGGCTGCTTATGGTGACAATCTGAG- 605
|| |||||||||||||||||||||||| |||| |||||||||||||||||||| ||
Sbjct 2018 CTCTGGGTGTCCGTGTTTCCTTTTATTCTTATATTGGCTGCTTATGGTGACAATTACAGA 1959
Query 606 ATTGTTATCATATAGCTATTGGATTAGCCATCCGGTG 642
||||||| ||||||||||||||||| |||||||||||
Sbjct 1958 ATTGTTACCATATAGCTATTGGATTGGCCATCCGGTG 1922
Score = 116 bits (128), Expect = 2e-22
Identities = 161/223 (72%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 1972 ACACTGCTAGGCAACATCAGCAGGTATTACACCCACTGGTCTGGTTCACTGGAGATGACT 2031
||| |||| ||| | || | | ||||||||||| ||||| || ||||||||| | |||
Sbjct 558 ACAATGCTGGGCCAACTCTGTGGATATTACACCCAGTGGTCAGGGTCACTGGAGGTCACT 499
Query 2032 TTCATGTTTTGTGGGAGCTTTATGACCACAGGTAAATTGATCATTTGCTACACACCACCT 2091
|| |||||| ||| || ||| ||||||||||| || |||| || ||||| |||
Sbjct 498 TTTATGTTTACCGGGTCTTTCATGGCCACAGGTAAAATGCTCATAGCTTATACACCTCCT 439
Query 2092 GGTGGATC-TAGCCCAACAGATAGGATGCAAGCCATGCTAGCTACTCATGTGGTGTGGGA 2150
|| || | | ||||| |||| || ||| ||||| | || ||||| | |||||
Sbjct 438 GGCGGCCCCTTACCCAA-AGATCGGGCCACAGCAATGCTGGGCACACATGTTATCTGGGA 380
Query 2151 CTTTGGGCTGCAATCTAGTATCACCATTATAATTCCTTGGATC 2193
|||||||||||||| | | ||| || |||| || ||||||
Sbjct 379 TTTTGGGCTGCAATCATCTGTTACCCTTGTAATACCATGGATC 337
>seq4341
Length=257
Score = 82.4 bits (90), Expect = 4e-12
Identities = 145/204 (71%), Gaps = 7/204 (3%)
Strand=Plus/Minus
Query 171 CACTTCTGTTTCCCCGGTGA-AGTTGCA-TAGACTGTACCCACGGTTGAAAGCGAT-GAA 227
||||||||||||||||| ||| || ||||||| | | |||||||| | || |
Sbjct 201 CACTTCTGTTTCCCCGGACCGAGTATCAATAGACTGCTCACGCGGTTGAAGGAGAAAGCG 142
Query 228 TCCGTTACCCGCTTAGGTACTTCGAGAAGCCTAGTATCATCTTGGAATCTTCGATGCGTT 287
||||||| ||| || ||||||||||| | ||||| || | | ||| || | | |||
Sbjct 141 TCCGTTATCCGGCTAACTACTTCGAGAAACTTAGTAACACCATTGAAGCTGCAGAGTGTT 82
Query 288 GCGATCAGCACTCTACCCCGAGTGTAGCTTGGGTCGATGAGTCTGGACACCCCACACCGG 347
|| || ||||| | |||| |||||| | |||||||||||| || || ||| ||
Sbjct 81 TCGCTCGGCACT-TCCCCC--GTGTAGATCAGGTCGATGAGTCACTGCAATCCCCACGGG 25
Query 348 CGA-CGTGGTCCAGGCTGCGTTGG 370
|| ||||| ||||||| |||
Sbjct 24 TGACCGTGGCAGTGGCTGCGCTGG 1
>seq3031
Length=367
Score = 78.8 bits (86), Expect = 4e-11
Identities = 107/147 (73%), Gaps = 2/147 (1%)
Strand=Plus/Plus
Query 5752 TATGGTTTCCTTAATCTTGGGGGGACCCCCACCCACAGAATATTAATGTATAACTTCCCC 5811
|| || ||| | || ||| | || | || ||||| || | | ||||| || |||||
Sbjct 85 TACGGGTTCTTGAACCTTAGTGGAAAGCCAACCCATAGGACCATGATGTACAATTTCCCT 144
Query 5812 ACAAGAGCAGGACAATGTGGAGGGGTGGTGACCACCACTGGTAAAGTGATTGGCATTCAC 5871
|||| ||||||||| |||||||| ||||| || | ||||| | |||||||||||
Sbjct 145 ACAAAAGCAGGACAGTGTGGAGGTGTGGTCACGTCAGTCGGTAAGATTGTTGGCATTCAC 204
Query 5872 GTTGGTGGCAATGGTGCG-CAAGGCTT 5897
|||| ||||| || ||| ||||| ||
Sbjct 205 ATTGGCGGCAACGG-GCGCCAAGGGTT 230
Lambda K H
0.634 0.408 0.913
Gapped
Lambda K H
0.625 0.410 0.780
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