Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20murrelli_20[genbank_20GCA_5F001447425.1_202015-11-24]
5,242 sequences; 49,016,728 total letters
Query= NC_001859.1
Length=7414
Score E
Sequences producing significant alignments: (Bits) Value
seq1144 219 2e-53
seq643 203 2e-48
seq906 178 6e-41
seq945 120 1e-23
>seq1144
Length=1302
Score = 219 bits (242), Expect = 2e-53
Identities = 669/1017 (66%), Gaps = 34/1017 (3%)
Strand=Plus/Plus
Query 6279 CTTGAGGCACTTGATCTTGGAACTAGTGCGAGCTACCCGTACGTTGCAATGGGCATCAAG 6338
|| |||||| |||| || | |||||||| | ||||| ||| || | |||||||||
Sbjct 228 CTGGAGGCAATTGACCTCTGCACTAGTGCCGGGTACCCATACAGCGCCCTTGGCATCAAG 287
Query 6339 AAAAGAGATATT-TTGAATAAAGAGACCAGGGATGTCACTAAGATGCAAGAGTGCATAGA 6397
|||||||| ||| |||| | | ||||||||||| |||||||| || | || ||
Sbjct 288 AAAAGAGACATTCTTGACCCCACA-ACCAGGGATGTGTCTAAGATGAAATTCTATATGGA 346
Query 6398 TAAGTATGGTTTAAATCTACCCATGGTC-ACCTATGTCAAGGATGAACTCAGGGCGCCAG 6456
||| || || || |||| |||| || |||||||| |||||||| || ||| | | |
Sbjct 347 TAAATACGGGCTAGATCT-GCCATACTCTACCTATGTGAAGGATGAGCTTAGGTCCCTGG 405
Query 6457 ATAAGATCAGGAAAGGAAAAAGCCGTTTGATAGAGGCATCTAGCTTGAATGATTCAG--T 6514
|||| |||| ||||||||| || ||||||||||| |||||||||||| || | |
Sbjct 406 ATAAAATCAAGAAAGGAAAGTCACGCTTGATAGAGGCTAGTAGCTTGAATGACTCTGTCT 465
Query 6515 AGCCATGCGGTGCTACTTTGGGAACCTCTACAAGGTTTTCCACACCAACCCTGGAACCAT 6574
| | | ||| |||||| |||| || ||| || || | |||||||| || |
Sbjct 466 ACCTCAGAATGGCT--TTTGGGCACCTTTATGAGGCGTTTCATGCTAACCCTGGCACTGT 523
Query 6575 CTCCGGCTGTGCCGTTGGATGCGACCCTGAAACCTTCTGGAGCAAGATCCCAGTGATGAT 6634
| |||| || || || || |||| || || |||||||| | || | || |
Sbjct 524 GACTGGCTCAGCAGTGGGTTGTAACCCGGACGTGTTTTGGAGCAAACTACCGATTCTGCT 583
Query 6635 GGATGGTGAGCTTTTTGGCTTTGATTATACTGCATATGATGCTAGCCTGTCTCCCATGTG 6694
| ||| ||| |||| |||||| || | | |||||||||||| || || | ||
Sbjct 584 GCCTGGGTCGCTCTTTGCCTTTGACTACTCAGGATATGATGCTAGTCTCAGCCCGGTATG 643
Query 6695 GTTCCATGCCCTGGCAGAAGTCCTTAGACG---GATTGG--ATT-TGTTGAGTGCAAGCA 6748
||| || | | | |||||| | ||| |||||| ||| | ||| | |
Sbjct 644 GTT-CAGGGCTT--TAGAAGTTGTGTTACGGGAGATTGGGTATTCAGAGGAGGCCGTGTC 700
Query 6749 CTTTATTGATCAACTTTGCTGCAGCCACCACCTTTATATGGATAAGCACTATTATGTGGT 6808
| | || || | | || |||||| | ||| | | || || | ||| |
Sbjct 701 CCTAATAGAAGGGATCAACCACACCCACCATGTGTATCGGAACAAAACATACTGTGTACT 760
Query 6809 TGGGGGCATGCCTTCTGGCTGCTCTGGCACCTCCATCTTCAATTCTATGATTAACAACCT 6868
||| || ||||| || || || ||||| || |||||||| ||||| ||||| |||||| |
Sbjct 761 TGGTGGAATGCCCTCAGGATGTTCTGGTACTTCCATCTTTAATTCAATGATCAACAACAT 820
Query 6869 AATCATCCGCACTCTTGTGCTCACAGTTTATAAAAATATTGATTTGGATGATCTTAAGAT 6928
|||||| | || ||| || ||| | || ||| || || ||||||| | || ||
Sbjct 821 CATCATCAGAACCCTTTTGATCAAAACTTTTAAGGGAATAGACCTGGATGAGTTGAACAT 880
Query 6929 AATAGCCTACGGGGATGACGTGCTCGCGTCGTACCCGTATGAGATTGATGCCAGCCT--- 6985
| ||||| ||||| || ||||| || ||||| | | |||||| ||||
Sbjct 881 GGTGGCCTATGGGGACGATGTGCTGGCTAGTTACCCCTTTCCCATTGAT---TGCCTTGA 937
Query 6986 CTTGGCAGAAGCTGGTAAAAGCTTTGGTCTAATCATGACTCCACCAGATAAATCTGCGGA 7045
||||| | |||| ||| | |||| | | ||||||||| |||| ||||| |
Sbjct 938 GTTGGCTAAGACTGGCAAAGAGTATGGTTTGACCATGACTCCTGCAGACAAATCACC--- 994
Query 7046 GTTTGTCA---AATTAACCTGGGATAACGTGACCTTTTTGAAGAGGAAGTTCGTGCGTGA 7102
| | ||| || |||| ||||| || | ||||| ||||||| ||| ||| ||
Sbjct 995 CTGTTTCAATGAAGTAACATGGGAAAATGCTACCTTCCTGAAGAGAGGATTCTTGCCAGA 1054
Query 7103 TGCACGGTACCCTTTCCTTGTACATCCGGTCATGGACATGTCGAACATCCATGAGTCCAT 7162
| | || ||| | | || || ||| |||| | |||||||| |||||
Sbjct 1055 CCACCAATTTCCATTCTTAATTCACCCTACGATGCCCATGAGAGAGATCCATGAATCCAT 1114
Query 7163 TCGGTGGACGAAAGATCCCAGGCATACTGAAGACCATGTCCGCTCACTTTGCCTATTGGC 7222
||| ||||| ||||| | | | || |||| || || ||||| || || || |||||
Sbjct 1115 TCGATGGACTAAAGACGCGCGCAACACCCAAGATCACGTGCGCTCCCTGTGTCTGTTGGC 1174
Query 7223 CTGGCATTGTGGCGAGGAAGAATACAACGAATTTGT---TACAA--AGATCCGTTCC 7274
||||| ||| |||| ||||| | | ||||| | ||| ||||| |||||
Sbjct 1175 ATGGCACAATGGTAAGGATGAATATGAGAAGTTTGTGAGTGCAATTAGATCAGTTCC 1231
>seq643
Length=7254
Score = 203 bits (224), Expect = 2e-48
Identities = 941/1470 (64%), Gaps = 49/1470 (3%)
Strand=Plus/Minus
Query 5785 TGAACCTTGCTGGCAGGCCAACACATAGAGTTTTGATGTATGAATTCCCCACCAAGGCAG 5844
|||||||| ||| | ||| || || || | ||||||| | ||||| || || ||||
Sbjct 1580 TGAACCTTAGTGGTAAGCCCACTCACAGGACTATGATGTACAATTTCCCAACAAAAGCAG 1521
Query 5845 GCCAATGCGGTGGTGTGGTTATTAGCATGGGTAAGATAGTGGGTGTCCACGTAGGAGGTA 5904
| || || |||||||| || | | | ||||||| | | || ||||| | || || |
Sbjct 1520 GACAGTGTGGTGGTGTTGTGACTGCCGTGGGTAAAGTGATTGGGATCCACATTGGTGGCA 1461
Query 5905 ACGGTGCCCAAGGTTTTGCCGCCTCCCTTCTACGCAGGTACTTTA-CAGCAGAACAAGGA 5963
||||| |||||||| ||| |||| | | |||||| ||| ||||||||
Sbjct 1460 ACGGTAGGCAAGGTTTCTGCGCTGCCCTGAAGAGGGGATACTTTTGCAGT-GAACAAGGT 1402
Query 5964 CAAATTGAATATATCGAGAAGAGTAAAGA---TGCCGGGTACCCCGTGATCAATGCACCC 6020
| || ||| || || | ||||| || | ||| | ||||| | |||
Sbjct 1401 GAGATCCAATGGATGAAGCCCAACAAAGAAACTGGCAGGTTGAAC---ATCAACGGACCT 1345
Query 6021 ACCCAAACCAAATTAGAGCCCAGTGTTTTCTTTGATGTTTTCCCCGGGGTGAAAGAACCA 6080
|| | || || | || || ||||| || ||||| ||| || ||||| |||
Sbjct 1344 ACTCGCACAAAGCTTGAACCAAGTGTCTTTCACGATGTGTTCGAAGGCACTAAAGAGCCA 1285
Query 6081 GCGGTACTCCACAAG-AAGGACAAGAGGCTTGAAACCAACTTTGAGGAAGCTCTATTTTC 6139
|| || || || || || ||| ||||| ||| ||||||| | ||||| |||||
Sbjct 1284 GCAGTGCTG-ACTAGTAAAGACCCAAGGCTGGAAGTTGACTTTGAACAGGCTCTTTTTTC 1226
Query 6140 CAAGTACATAGGAAATGTACAAAGGGACATG--CCTGAGGAATTACTCATTG------CC 6191
|| ||| | || || | | |||| || || || || ||| | ||
Sbjct 1225 AAAATACGTGGGGAAC-----ACGCTTCATGAACCCGACGAGTTTGTCAAGGAGGCGGCC 1171
Query 6192 ATAGATCATTATTCTGAACAACTCAAAATGTTGAATATTGACCCGAGGCCCATTTCA--A 6249
|| |||||| | | |||||||| ||| |||| | | | || | | | |
Sbjct 1170 TTA---CATTATGCCAACCAACTCAAGCAGTTAGATATCAAGACCA--CCAAGATGAGCA 1116
Query 6250 TGGAGGATGCAATTTACGGTACAGAGGGGCTTGAGGCACTTGATCTTGGAACTAGTGCGA 6309
||||||||||| |||||| |||||| || || || | |||||| || |||||
Sbjct 1115 TGGAGGATGCATGTTACGGCACAGAGAACCTGGAAGCTATAGATCTTCACACAAGTGCAG 1056
Query 6310 GCTACCCGTACGTTGCAATGGGCATCAAGAAAAGAGATATTTTGAATAAAGAGACCAGGG 6369
| || || ||| |||| | ||||||||||||| || |||||| || | || | |
Sbjct 1055 GATATCCATACAGTGCACTAGGCATCAAGAAAAAGGACATTTTGGATCCAACAACTCGCG 996
Query 6370 ATGTCACTAAGATGCAAGAGTGCATAGATAAGTATGGTTTAAATCTACCCATGGTC-ACC 6428
|||||| |||||| || | ||| || |||||||| || ||||| || | || ||
Sbjct 995 ATGTCAGCAAGATGAAATTCTACATGGACAAGTATGGGTTGGATCTA-CCGTACTCTACT 937
Query 6429 TATGTCAAGGATGAACTCAGGGCGCCAGATAAGATCAGGAAAGGAAAAAGCCGTTTGATA 6488
||||| || |||||||| ||||| || ||||||| |||||| || ||| | |||
Sbjct 936 TATGTTAAAGATGAACTTAGGGCCATCGACAAGATCAAGAAAGGGAAGTCTCGTCTCATA 877
Query 6489 GAGGCATCTAGCTTGAATGATTCAGTAGCCATGCG-GTGCTACTTTGGGAACCTCTACAA 6547
|| || ||| | ||||| ||||| | || | || | |||||| |||| || |
Sbjct 876 GAAGCGAGCAGCCTAAATGACTCAGTGTACTTGAGAATGACA-TTTGGGCACCTTTATGA 818
Query 6548 GGTTTTCCACACCAACCCTGGAACCATCTCCGGCTGTGCCGTTGGATGCGACCCTGAAAC 6607
| ||||||| |||| || || || ||| |||| | || ||||| ||| |||| ||
Sbjct 817 AGCTTTCCACGCCAATCCAGGTACAATCACCGGTTCAGCTGTTGGGTGCAACCCAGATGT 758
Query 6608 CTTCTGGAGCAAGATCCCAGTGATGATGGATGGTGAGCTTTTTGGCTTTGATTATACTGC 6667
|||||||||||| | ||| | | | || |||||| | ||||| || | |
Sbjct 757 GTTCTGGAGCAAGTTACCAATTCTACTCCCAGGATCGCTTTTCGCGTTTGACTACTCGGG 698
Query 6668 ATATGATGCTAGCCTGTCTCCCATGTGGTTCCATGCCCTGGCAGA-AGTCCTTAGACGGA 6726
||||| ||||| || || |||||||| || |||| ||| |||||| | |
Sbjct 697 GTATGACGCTAGTCTCAGCCCAGTGTGGTTCAGGGCGCTGG-AGATAGTCCTGCGGGAAA 639
Query 6727 TTGGATTTGTTGAGTGCAAGCACTTTAT-TGATCAACTTTGCTGCAGCCACCACCTTTAT 6785
||||| | | | | ||| | | | | || | | || ||| || | ||
Sbjct 638 TTGGA--TACTCCGAAGACGCAGTGTCTCTCAT--AGAAGGGATCAATCACACCCATCAT 583
Query 6786 ATG------GATAAGCACTATTATGTGGTTGGGGGCATGCCTTCTGGCTGCTCTGGCACC 6839
|| |||| |||| ||| ||||||| ||||| || || ||||| ||||||
Sbjct 582 GTGTACCGCAATAAAACTTATTGTGTTCTTGGGGGAATGCCCTCAGGTTGCTCAGGCACC 523
Query 6840 TCCATCTTCAATTCTATGATTAACAACCTAATCATCCGCACTCTTGTGCTCACAGTTTAT 6899
||||| ||||| || ||||| ||||| | || || | || || || | | | |
Sbjct 522 TCCATTTTCAACTCGATGATCAACAATATCATTATTAGAACACTCCTGATTAAAACATTC 463
Query 6900 AAAAATATTGATTTGGATGATCTTAAGATAATAGCCTACGGGGATGACGTGCTCGCGTCG 6959
||| || ||| | ||||| || || || | |||||||||||||| ||| | ||
Sbjct 462 AAAGGGATAGATCTAGATGAACTGAACATGGTGGCCTACGGGGATGATGTGTTGGCTAGT 403
Query 6960 TACCCGTATGAGATTGA-TGCCAGCCTCTTGGCAGAAGCTGGTAAAAGCTTTGGTCTAAT 7018
||||| | ||||| || | | |||||| | | || || | ||||||||
Sbjct 402 TACCCCTTCCCAATTGACTGTCTG-GAGTTGGCAAGAACAGGCAAGGAGTATGGTCTAAC 344
Query 7019 CATGACTCCACCAGATAAATCTGCGGAGTTTGTCAAATTAACCTGGGATAACGTGACCTT 7078
||||| || | || || || | ||| | | || ||||| || | || ||
Sbjct 343 TATGACCCCTGCCGACAAGTCACCCTGCTTTAATGAGGTTACATGGGAGAATGCCACTTT 284
Query 7079 TTTGAAGAGGAAGTTCGTGCGTGATGCACGGTACCCTTTCCTTGTACATCCGGTCATGGA 7138
|||||||| ||| ||| |||| | | ||| || || | || || |||
Sbjct 283 CTTGAAGAGAGGATTCTTGCCTGATCATCAATTCCCGTTTCTCATCCACCCTACGATGCC 224
Query 7139 CATGTCGAACATCCATGAGTCCATTCGGTGGACGAAAGATCCCAGGCATACTGAAGACCA 7198
||| | | || || || |||||||| ||||| |||||| | | |||| |||| ||
Sbjct 223 AATGAGGGAGATTCACGAATCCATTCGTTGGACCAAAGATGCACGAAGTACTCAAGATCA 164
Query 7199 TGTCCGCTCACTTTGCCTATTGGCCTGGCA 7228
|| ||||| || ||| |||| || |||||
Sbjct 163 CGTGCGCTCCCTCTGCTTATTAGCATGGCA 134
Score = 116 bits (128), Expect = 2e-22
Identities = 258/382 (68%), Gaps = 4/382 (1%)
Strand=Plus/Minus
Query 1017 CCACTTAAGTCACCAAGCGCAGAAGCGTGCGGTTACAGTGATCGCGTAGCCCAGTTGACA 1076
||| | || || ||| || || || || |||||||||||||| || || || || ||
Sbjct 6434 CCATTAAAATCTCCATCTGCTGAGGCATGTGGTTACAGTGATCGGGTGGCACAATTAACT 6375
Query 1077 CTTGGCAACAGCACTATCACTACCCAAGAGGCAGCAAATATATGCGTTGCTTATGGCTGC 1136
||||||| || |||||||| ||||| |||||||| || |||| |||||
Sbjct 6374 ATTGGCAATTCTACCATCACTACGCAAGAAGCAGCAAACATCATAGTTGGCTATGGTGAG 6315
Query 1137 TGGCCTGCAAAGCTTAGCGACACTGATGCCACATCAGTGGACAAGCCCACTGAACCAGGT 1196
|||||| | | | ||| |||||||||| |||||||||| || || |||| |
Sbjct 6314 TGGCCTTCCTACTGTTCGGACTCTGATGCCACTGCAGTGGACAAACCAACGCGCCCAGAT 6255
Query 1197 GTATCAGCGGAGCGCTTTTATACCCTCCGTTCCAAGCCGTGGCAGGCAGATA-GCAAGGG 1255
|| || | | | | ||||| || | | || |||| | | || | ||||||
Sbjct 6254 GTTTCGGTGAATAGGTTTTACACATTGGACACAAAATTGTGGGA-GAAGTCATCCAAGGG 6196
Query 1256 GTGGTATTGGAAGCTACCCGATGCACTCAACAATACAGGAATGTTTGGACAGAACGCCCA 1315
|||||| ||||| | || |||| | | | || || | ||||| || || || ||
Sbjct 6195 GTGGTACTGGAAATTCCCGGATGTGTTAACTGAAACCGGGGTCTTTGGTCAAAATGCACA 6136
Query 1316 GTTCCACTACATCTATAGAGGTGGG-TGGGCAGTGCACGTCCAATGCAATGCAACCAAAT 1374
|||||||||| ||||| | ||| | ||| | ||||| || |||||||| | || |
Sbjct 6135 GTTCCACTACCTCTATCGGTCAGGGTTCTGCA-TTCACGTGCAGTGCAATGCTAGTAAGT 6077
Query 1375 TCCACCAGGGCACGCTCCTTGT 1396
||||||| || | ||||| ||
Sbjct 6076 TCCACCAAGGAGCACTCCTAGT 6055
Score = 105 bits (116), Expect = 3e-19
Identities = 126/163 (77%), Gaps = 6/163 (4%)
Strand=Plus/Minus
Query 498 AAGAGCCTATTGTGCTAGAGAGGTTTTCCTCCGGAGCCGTGAATGCTGCTAATCCCAACC 557
|||||||||||| ||||| ||| |||||||| || ||||||| |||||||| |||
Sbjct 6955 AAGAGCCTATTGAGCTAG-CTGGTAGTCCTCCGG-CCCCTGAATGCGGCTAATCCTAACT 6898
Query 558 TCCGAGCGTGTGCGCACAATCCAGT-GTTGCTACGTCGTAACGCGCAAGTTGGAGGCGGA 616
| |||| ||| ||| | ||||| | || | ||||||||| |||| | | |||||
Sbjct 6897 GCGGAGCACATGCTCACGAACCAGTGGGTGGTGTGTCGTAACGGGCAACTCTGCAGCGGA 6838
Query 617 ACAGACTACTTTCGGTACTCCGTGTTTCCTTATTATT-TTATA 658
|| ||||||||| ||| ||||||||||||| ||||| |||||
Sbjct 6837 ACCGACTACTTTGGGT-GTCCGTGTTTCCTT-TTATTCTTATA 6797
>seq906
Length=2416
Score = 178 bits (196), Expect = 6e-41
Identities = 469/703 (67%), Gaps = 20/703 (3%)
Strand=Plus/Plus
Query 4164 AAGTTTATTGATTGGCTTAAACAAAAGATCCTACCAGAACTCAAAGAGAGAGCAGAGTTC 4223
||||| ||||| ||||| | | ||||| | |||| | ||| |||| |||||| ||
Sbjct 882 AAGTTCATTGACTGGCTCAGGGAGAAGATTGTTCCAGCAGCCAAGGAGAAAGCAGAATTT 941
Query 4224 GTCAAGAAGTTAAAACAGCTCCCACTCTTAGAGGCTCAGGTGAACACTCTGGAACACTCT 4283
| | || || || || | ||||| |||||| ||| | | | | || || ||
Sbjct 942 TTAACCAATTTGAAGCAATTGCCACTGTTAGAGAACCAGATCACGAACTTAGAGCAGTCC 1001
Query 4284 TCCGCTAGTCAGGAGAGG--CAAGAACAATTGTTTGGGAATGT-TCAGTACCTTGCCCAT 4340
| || ||| ||||| | ||| ||||||||||||| ||| ||||| ||||||
Sbjct 1002 GCTGCC--TCACAAGAGGACCTTGAAGCTATGTTTGGGAATGTGTCA-TACCTCGCCCAT 1058
Query 4341 CATTGTAGAAAGAACGCCCCGCTTTATGCCGCAGAAGCTAAGCGCGTCTACCATCTAGAG 4400
||| | ||| | || | || ||| | ||||||||||| ||||| |||||||
Sbjct 1059 TTCTGTCGCAAGTTCCAACCATTATACGCCACGGAAGCTAAGCGAGTCTATGTTCTAGAG 1118
Query 4401 AAGCGCGTCCTCCGTGCCATGCAGTTCAAGACCAAGAACCGCATTGAACCTGTATGTGCA 4460
||| | | | |||||||||||||| ||| |||| |||||||||||||||
Sbjct 1119 AAGAGAATGAACAACTACATGCAGTTCAAGAGCAAACACCGTATTGAACCTGTATGTCTC 1178
Query 4461 CTGATTCATGGCTCACCTGGTACCGGTCAGTCGTTGGCTAC---TATGATAG-TAGGAAG 4516
| ||| |||||||| || || || |||| | || || ||| || | | ||
Sbjct 1179 ATCATTAGAGGCTCACCAGGCACTGGAAAGTCCCTTGCGACCGGTATCATTGCTCGGGTC 1238
Query 4517 AAAACTGGCTGAGTACGAAGGTTCCGACGTCTACTCCCTACCGCCTGACCCGGATCATTT 4576
| | | | | |||| | || || ||||| || || || ||||| || |||||
Sbjct 1239 ATAGCAGACA-AGTATCAC---TCTAGTGTGTACTCACTTCCACCAGACCCTGACCATTT 1294
Query 4577 TGATGGCTACCAACAACAAGCCGTCGTAGTGATGGATGATTTACTTCAAAACCCCGATGG 4636
||| || || |||| |||| ||| ||| ||||||||| | ||||||||| || ||
Sbjct 1295 TGACGGGTATAAACAGCAAGTGGTCACAGTTATGGATGATCTGTGTCAAAACCCTGACGG 1354
Query 4637 GAAGGACATGACCTTGTTTTGCCAAATGGTTTCGACGGCTCCTTTTACTGTGCCCATGGC 4696
|| |||||| | || |||||||| ||||| || || | ||||| || |||||
Sbjct 1355 CAAAGACATGTCATTATTTTGCCAGATGGTGTCCACCGTGGATTTTATCCCACCAATGGC 1414
Query 4697 TGCTTTGGAGGATAAGGGGAAGCT--CTTCACTTCCAAATTTGTGCTAGCTTCTACTAAT 4754
| || | || || ||||| || | |||||| || |||||||| | || || || ||
Sbjct 1415 TTCTCTCGAAGAAAAGGG--AGTTTCCTTCACATCTAAATTTGTTATCGCATCCACCAAC 1472
Query 4755 GCAGGCCAAGTTACTCCGCCAACCGTGGCTGATTATAAGGCGCTGCAGAGAAGGTTTTTC 4814
|| || | ||| ||| || ||| | || | | | || | | | ||||||| |
Sbjct 1473 GCTAGCAACATTATAGTGCCTACAGTGTCAGACTCTGACGCCATTCGTCGCAGGTTTTAC 1532
Query 4815 TTTGATTGTGACATTGAGGT-CCAGAAGGAATACAAAAGAGAT 4856
| ||||| ||||||||||| ||| | |||||||| ||||
Sbjct 1533 ATGGATTGCGACATTGAGGTGACAG-ACTCATACAAAACAGAT 1574
>seq945
Length=2018
Score = 120 bits (132), Expect = 1e-23
Identities = 259/379 (68%), Gaps = 10/379 (3%)
Strand=Plus/Minus
Query 1017 CCACTTAAGTCACCAAGCGCAGAAGCGTGCGGTTACAGTGATCGCGTAGCCCAGTTGACA 1076
||||| ||||| ||| ||| ||||| || ||||||||||||||||| || || | ||
Sbjct 1623 CCACTGAAGTCTCCATCCGCTGAAGCTTGTGGTTACAGTGATCGCGTGGCACAACTCACC 1564
Query 1077 CTTGGCAACAGCACTATCACTACCCAAGAGGCAGCAAATATATGCGTTGCTTATGGCTGC 1136
|||| ||| ||| || ||||| || ||||| ||||| || || | ||| ||
Sbjct 1563 ATTGGGAACTCCACCATTACTACACAGGAGGCGGCAAACATCATAGTCGGTTACGGTGAG 1504
Query 1137 TGGCCTGCAAA--GCT-TAGCGACACTGATGCCACATCAGTGGACAAGCCCACTGAACCA 1193
||||| || | ||| | ||| || |||||| | |||||||| || || |||
Sbjct 1503 TGGCCCTCATACTGCTCTGATGAC---GACGCCACAGCGGTGGACAAACCAACGCGCCCA 1447
Query 1194 GGTGTATCAGCGGAGCGCTTTTATACCCTCCGTTCCAAGCCGTGGCAGGCAGATAGC-AA 1252
| ||| || | | | | |||||||| || | || | |||| | || | | ||
Sbjct 1446 GATGTTTCGGTGAATAGGTTTTATACACTGGACACTAAACTGTGGGA-AAAGTCATCTAA 1388
Query 1253 GGGGTGGTATTGGAAGCTACCCGATGCACTCAACAATACAGGAATGTTTGGACAGAACGC 1312
||| |||||||||||| | || |||| | | | || ||| | ||||| ||||||||
Sbjct 1387 GGGTTGGTATTGGAAGTTTCCTGATGTGTTGACTGAGACCGGAGTCTTTGGCCAGAACGC 1328
Query 1313 CCAGTTCCACTACATCTATAGAGGTGGG-TGGGCAGTGCACGTCCAATGCAATGCAACCA 1371
||||| ||||| | |||||| ||| | ||| | || || ||||| || || | ||
Sbjct 1327 ACAGTTTCACTATTTGTATAGATCAGGGTTTTGCA-TTCATGTGCAATGTAACGCTAGCA 1269
Query 1372 AATTCCACCAGGGCACGCT 1390
| ||||| || || ||||
Sbjct 1268 AGTTCCATCAAGGAGCGCT 1250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 23608207682864
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