Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20murrelli_20[genbank_20GCA_5F001447425.1_202015-11-24] 5,242 sequences; 49,016,728 total letters Query= NC_021220.1 Length=7397 Score E Sequences producing significant alignments: (Bits) Value seq643 203 2e-48 seq1144 132 2e-27 seq945 116 2e-22 seq906 107 9e-20 >seq643 Length=7254 Score = 203 bits (224), Expect = 2e-48 Identities = 649/996 (65%), Gaps = 32/996 (3%) Strand=Plus/Minus Query 5699 TTGTAAACACCTCAGCATAT-CCCAACCTGTTCATGCCAGTTGGTGCAGTGAAGGACTAC 5757 || |||| || | | ||||| |||| |||| |||||||||| | ||| | || Sbjct 1646 TTATAAATAC-TGAACATATGCCCAGTATGTTTGTGCCAGTTGGAGATGTGGTCCAGTAT 1588 Query 5758 GGCTACCTCAACCTAGCAGGTAGGCCCACACACCGTACGCTTATGTACAACTTTCCGACA 5817 || | | ||||| |||| |||||| ||| | || | |||||||| || || ||| Sbjct 1587 GGGTTTTTGAACCTTAGTGGTAAGCCCACTCACAGGACTATGATGTACAATTTCCCAACA 1528 Query 5818 AGAGCAGGACAGTGTGGTGGTGTCGCGGTCTCCATGGGCAAAGTGATTGGCATCCACATT 5877 | ||||||||||||||||||||| | | || |||| ||||||||||| ||||||||| Sbjct 1527 AAAGCAGGACAGTGTGGTGGTGTTGTGACTGCCGTGGGTAAAGTGATTGGGATCCACATT 1468 Query 5878 GGAGGTAATGGAGCACAAGGTTT-TGCAGCAGCGTTACTCCGCAGGTACTT---CACTCA 5933 || || || || |||||||| ||| || || | | | ||||| || | | Sbjct 1467 GGTGGCAACGGTAGGCAAGGTTTCTGC-GCTGCCCTGAAGAGGGGATACTTTTGCAGTGA 1409 Query 5934 ACCCCAGGGAGAAATTGAGTTCATGGAGAAAAGCAAGGAC----GCAGGATATCCTATCA 5989 || | || || || | | ||| || | ||| || ||||| | | || Sbjct 1408 AC---AAGGTGAGATCCAATGGATGAAGCCCAACAAAGAAACTGGCAGGTTG----AACA 1356 Query 5990 TCAACGCACCCACTAAAACCAAGCTCCACCCCAGCGTGTTCTTTGATGTTTTCCCAGGTG 6049 |||||| ||| ||| || ||||| | || || || || ||||| ||| ||| Sbjct 1355 TCAACGGACCTACTCGCACAAAGCTTGAACCAAGTGTCTTTCACGATGTGTTCGAAGGCA 1296 Query 6050 AGAAAGAACCAGCAGTTCTCCACAGGAAGGATAAGAGGCTAGAAGTTGACTTCGAGGAAG 6109 ||||| |||||||| || || || || ||||| ||||||||||| || | | Sbjct 1295 CTAAAGAGCCAGCAGTGCTGACTAGTAAAGACCCAAGGCTGGAAGTTGACTTTGAACAGG 1236 Query 6110 CTCTCTTTTCTAAGTATATTGGCAACATCCACAAGCCTGTGACCGAGGAGAT------GG 6163 |||| ||||| || || | || |||| | | || |||| ||| | || Sbjct 1235 CTCTTTTTTCAAAATACGTGGGGAACACGCTTCA---TGAACCCGACGAGTTTGTCAAGG 1179 Query 6164 AGATAGCAATAGACCATTATGCTAATCAGCTCAAACAACTTAATATTGATCCCACCCCTA 6223 || || || |||||||| || || ||||| || | |||| | ||||| | Sbjct 1178 AGGCGGCCTTA---CATTATGCCAACCAACTCAAGCAGTTAGATATCAAGACCACCAAGA 1122 Query 6224 TCAGTATGGAAGACGCCATCTATGGTACAGAGGGTCTTGAAGCACTTGATCTTGGAACTA 6283 | || ||||| || || || || |||||| || ||||| | |||||| || | Sbjct 1121 TGAGCATGGAGGATGCATGTTACGGCACAGAGAACCTGGAAGCTATAGATCTTCACACAA 1062 Query 6284 GTGCAGGTTACCCATACGTGGCGCTGGGCATTAAGAAGAGAGATATACTCAA-CAAAGAG 6342 ||||||| || |||||| || || ||||| ||||| | || || | | | || | Sbjct 1061 GTGCAGGATATCCATACAGTGCACTAGGCATCAAGAAAAAGGACATTTTGGATCCAACA- 1003 Query 6343 ACTAGAGATGTCTCCAAAATGCAGCAATGCATAGACAAGTACGGGCTCAACCTACCCATG 6402 ||| | |||||| ||| ||| | | ||| |||||||| ||| | | ||||| Sbjct 1002 ACTCGCGATGTCAGCAAGATGAAATTCTACATGGACAAGTATGGGTTGGATCTACCGTAC 943 Query 6403 GTTACCTATGTGAAGGATGAGCTCAGGTCAAAAGAGAAAGTGAAGAAGGGCAAAAGCCGA 6462 ||| ||||| || ||||| || ||| | | || || | ||||| || || || Sbjct 942 TCTACTTATGTTAAAGATGAACTTAGGGCCATCGACAAGATCAAGAAAGGGAAGTCTCGT 883 Query 6463 CTCATTGAAGCGTCGAGTCTAAATGATTCCGTTGCGATGAGGTGCGCCTTCGGAAATCTC 6522 ||||| |||||| || |||||||| || || |||| | || || | || Sbjct 882 CTCATAGAAGCGAGCAGCCTAAATGACTCAGTGTACTTGAGAATGACATTTGGGCACCTT 823 Query 6523 TACAAGGCTTTTCACACAAACCCAGGCACCCTCACGGGGTGTGCAGTTGGGTGCAACCCT 6582 || | ||||| ||| | || ||||| || |||| || | || |||||||||||||| Sbjct 822 TATGAAGCTTTCCACGCCAATCCAGGTACAATCACCGGTTCAGCTGTTGGGTGCAACCCA 763 Query 6583 GAGACCTTTTGGAGCAAAATCCCGGTCATGATGGACGGAGAGCTTTTTGGCTTCGACTAC 6642 || || |||||||| | || | | | ||| |||||| | || |||||| Sbjct 762 GATGTGTTCTGGAGCAAGTTACCAATTCTACTCCCAGGATCGCTTTTCGCGTTTGACTAC 703 Query 6643 ACTGCGTATGACGCCAGTCTCTCCCCTGTCTGGTTC 6678 | | ||||||||| |||||| ||| || |||||| Sbjct 702 TCGGGGTATGACGCTAGTCTCAGCCCAGTGTGGTTC 667 Score = 123 bits (136), Expect = 1e-24 Identities = 504/789 (64%), Gaps = 4/789 (1%) Strand=Plus/Minus Query 3955 GACATCATTACTGTGACAGCAACCCTATCCTTGCTTGGGTGCTCAGGCTCCCCTTGGCGC 4014 ||||| | || |||| ||||| || || || | |||||| || ||||||| | Sbjct 3378 GACATGGTCACATTGACGGCAACACTTGCCCTGATCGGGTGCCACGGGAGCCCTTGGGCC 3319 Query 4015 TGGCTTAAATCAAAGATTTGCTCGATCTTGGGTATTAACATGGCACAGAAGCAGGCTGAC 4074 ||| |||| || |||| || || ||||| || ||||| ||||||||| || | Sbjct 3318 TGGGTTAAGTCGAAGACAGCATCAATTTTGGGCATACCGATGGCTCAGAAGCAGAGTGCC 3259 Query 4075 GGCTGGGTTAAGAAGTTTACTGAGGCAGTTAACGCCTTTAAGGGTTTGGACTGGATCGCT 4134 ||| | |||||||| | || || | | ||| ||||| | || |||||| | Sbjct 3258 TCTTGGTTAAAGAAGTTCAACGATGCGGCGAGTGCCGCGAAGGGGCTTGAGTGGATCTCC 3199 Query 4135 GCCAAGTTGTCCAAGTTCCTTGATTGGATCAAATCCAAGATCATCCCGGA-GCTCAGAGA 4193 ||| | || || | |||||| |||| || ||||| |||| ||| | ||| Sbjct 3198 AACAAAATCAGTAAATTTATCGATTGGCTCAAGGAGAAAATCATACCGGCTGCTAA-AGA 3140 Query 4194 GAGAGCGGAGTTTGTTAAGAATCTTAGGCAGCTTCCTCTTCTCGAGGCCCAGATCACCAC 4253 || || |||||| | || ||||| | ||| || || | | ||| ||| || | | Sbjct 3139 GAAAGTCGAGTTTCTAAACAATCTAAAGCAACTCCCCTTATTGGAGAACCAAATTTCTAA 3080 Query 4254 TTTGGAGCACTCCAACCCTAATCAGGAGACCCAAGAACAGCTTTTCTCGAACGTCCAATA 4313 | | || || || || |||||| || || | | || ||||| || Sbjct 3079 TCTCGAACAGTCAGCAGCTTCGCAGGAGGACCTTGAGGCGATGTTTGGCAACGTGTCTTA 3020 Query 4314 CCTGGCACACCACTGTAGGAAGAACGCTCCGCTCTATGCAGCGGAAGCCCGGAGAGTTTT 4373 |||||| ||| ||| | || | || |||||||| ||||||| ||| || | Sbjct 3019 CCTGGCCCACTTCTGCCGCAAATTCCAACCCCTCTATGCCACGGAAGCAAAGAGGGTGTA 2960 Query 4374 CGCACTAGAGAAACGCGTCCTTGGAGCAATGCAGTTCAAGACCAAGAATCGAATTGAACC 4433 ||| ||||| || | | | ||||||||||||| ||| | || |||||||| Sbjct 2959 CGCCCTAGAAAAGAGAATGAATAATTACATGCAGTTCAAGAGCAAACACCGTATTGAACC 2900 Query 4434 TGTTTGCTGTTTGATCCATGGAACGCCGGGCACTGGTAAATCACTTGCCACGACTATTAT 4493 ||| ||| | ||| || |||| || ||||| || ||| | || || ||||| Sbjct 2899 TGTATGCCTAATTATCAGAGGCTCGCCTGGTACTGGGAAGTCATTGGCAACAGGGATTAT 2840 Query 4494 TGGCAGGAAGATCGCTGAGTACGAGAATAGCGGGGTCTATAGTTTGCCACCTGACCCAGA 4553 || || || || || | | | | | || ||| || || || |||||||| Sbjct 2839 TGCTAGAGCCATAGCAGACAAGTACCACTCCAGTGTGTATTCCTTACCTCCAGACCCAGA 2780 Query 4554 CCACTTTGATGGCTACGCCGAGCAGGCAGTTGTAATTATGGATGATCTGCATCAGAACCC 4613 ||||||||| || ||| | ||| || ||||||| || || || ||||| Sbjct 2779 CCACTTTGACGGATACAAACAACAGATCGTCACTGTTATGGACGACCTATGCCAAAACCC 2720 Query 4614 AGACGGCAAAGATATGAGCTTGTTTTGTCAGATGGTTTCCACCACCCCCTTCGTGGTTCC 4673 |||||| ||||| ||| | |||||||||||||| ||||| || | || Sbjct 2719 AGACGGGAAAGACATGTCACTATTTTGTCAGATGGTCTCCACAGTGGATTTTATACCGCC 2660 Query 4674 GATGGCTGCTCTCGAGGATAAAGGTAGACT-TTTCACCTCCAAATATGTGCTGGCCTCAA 4732 ||||| |||| ||||| |||| || || ||||||||||| | |||| | ||||| | Sbjct 2659 TATGGCATCTCTGGAGGA-GAAGGGAGTCTCATTCACCTCCAAGTTTGTGATTGCCTCCA 2601 Query 4733 CAAATGCCA 4741 | || |||| Sbjct 2600 CTAACGCCA 2592 Score = 93.3 bits (102), Expect = 2e-15 Identities = 144/202 (71%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 2078 GGTATTACACCCAGTGGTCTGGGTCCATAGAGTTCACCTTCATGTTTTGCGGGACTTTCA 2137 |||| |||||||| ||||| || || | || ||||||||||||| |||| | || | Sbjct 5347 GGTACTACACCCAATGGTCAGGATCACTGGAAGTCACCTTCATGTTCACCGGGTCCTTTA 5288 Query 2138 TGTCCACGGGCAAGGTTATAATCGCGTACACCCCACCTGGAGGCACAGCCCCCA--CATC 2195 || | || |||||| | | || || ||||| ||||| |||||| | |||| | | Sbjct 5287 TGGCTACCGGCAAGATGCTCATAGCATACACACCACCAGGAGGCCCCTTACCCAAGGACC 5228 Query 2196 GCGCCGAGAGGCGATGCTGGGGACCCACATAGTTTGGGACTTTGGTCTACAATCCTCGAT 2255 | | ||| || ||| |||| || ||| | | ||||||||||| || ||||| || | Sbjct 5227 G-GGCGA-CCGCCATGTTGGGCACGCACGTCATCTGGGACTTTGGGCTGCAATCGTCTGT 5170 Query 2256 AACCCTTGTTGTCCCCTGGATC 2277 |||||||| | || |||||| Sbjct 5169 CACCCTTGTAATACCATGGATC 5148 Score = 80.6 bits (88), Expect = 1e-11 Identities = 86/114 (75%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 7126 GATATTCATGAGTCCATTCGTTGGACCAAGGATGCTAAATCTACCCAGGATCATGTTAGA 7185 || ||||| || ||||||||||||||||| ||||| | ||| || ||||| || | Sbjct 216 GAGATTCACGAATCCATTCGTTGGACCAAAGATGCACGAAGTACTCAAGATCACGTGCGC 157 Query 7186 TCCCTGTGCCTATTGGCCTGGCACTGCGGACAAGAACAGTATGAAGAGTTTCTG 7239 ||||| ||| |||| || |||||| ||| |||| |||||||| | ||| || Sbjct 156 TCCCTCTGCTTATTAGCATGGCACAACGGGAAAGAGGAGTATGAAAAATTTGTG 103 >seq1144 Length=1302 Score = 132 bits (146), Expect = 2e-27 Identities = 432/656 (66%), Gaps = 20/656 (3%) Strand=Plus/Plus Query 6033 TGATGTTTTCCCAGGTGAGAAAGAACCAGCAGTTCTCCACAGGAAGGATAAGAGGCTAGA 6092 |||||| || |||| | || |||||||||||| | || || || || | || Sbjct 2 TGATGTGTTTGAAGGTAATAAGGAACCAGCAGTTTTAACAAGTAAAGACCCTAGATTGGA 61 Query 6093 AGTTGACTTCGAGGAAGCTCTCTTTTCTAAGTATATTGGCAACATC---CACAAGCCTG- 6148 || ||||| || |||| || ||||| |||||| | ||||| | ||| |||| | Sbjct 62 GGTCGACTTTGAACAAGCCCTGTTTTCCAAGTATGTGGGCAATGTTTTACACGAGCCCGA 121 Query 6149 TGACCGAGGAGA-TGGAGATAGCAATAGACCATTATGCTAATCAGCTCAAACAACTTAAT 6207 ||| | | || | || | || | ||| || || ||||| || |||||| | | Sbjct 122 TGAAT-ATGTGACTCAAGCT-GCCCT---CCACTACGCGAATCAACTTAAACAATTGGAC 176 Query 6208 ATTGATCCCACCCCTATCAGTATGGAAGACGCCATCTATGGTACAGAGGGTCTTGAAGCA 6267 || | | | | || || ||||| || || |||||| || || || || ||| Sbjct 177 ATAAACACTAGCAAGATGAGCATGGAGGAAGCGTGCTATGGCACTGAAAACCTGGAGGCA 236 Query 6268 CTTGATCTTGGAACTAGTGCAGGTTACCCATACGTGGCGCTGGGCATTAAGAAGAGAGAT 6327 |||| || | |||||||| || ||||||||| || || ||||| ||||| ||||| Sbjct 237 ATTGACCTCTGCACTAGTGCCGGGTACCCATACAGCGCCCTTGGCATCAAGAAAAGAGAC 296 Query 6328 ATACTCAACAAAGAGACTAGAGATGTCTCCAAAATGCAGCAATGCATAGACAAGTACGGG 6387 || || || || || ||||| || || ||| | | || || || |||||| Sbjct 297 ATTCTTGACCCCACAACCAGGGATGTGTCTAAGATGAAATTCTATATGGATAAATACGGG 356 Query 6388 CTCAACCTACCCATGGT-TACCTATGTGAAGGATGAGCTCAGGTCAAAAGAGAAAGTGAA 6446 || | || || || | ||||||||||||||||||||| ||||| || ||| | || Sbjct 357 CTAGATCTGCC-ATACTCTACCTATGTGAAGGATGAGCTTAGGTCCCTGGATAAAATCAA 415 Query 6447 GAAGGGCAAAAGCCGACTCATTGA-AGCGTCGAGT---CTAAATGATTCCGTTGCGATGA 6502 ||| || |||| | || | |||| || | | ||| | ||||| || || | | Sbjct 416 GAAAGG--AAAGTC-ACGC-TTGATAGAGGCTAGTAGCTTGAATGACTCTGTCTACCTCA 471 Query 6503 GGTGCGCCTTCGGAAATCTCTACAAGGCTTTTCACACAAACCCAGGCACCCTCACGGGGT 6562 | || || || | || || |||| ||||| | ||||| ||||| | || || | Sbjct 472 GAATGGCTTTTGGGCACCTTTATGAGGCGTTTCATGCTAACCCTGGCACTGTGACTGGCT 531 Query 6563 GTGCAGTTGGGTGCAACCCTGAGACCTTTTGGAGCAAAATCCCGGTCATGATGGACGGAG 6622 ||||| || || ||||| || |||||||||||| | ||| | || || || Sbjct 532 CAGCAGTGGGTTGTAACCCGGACGTGTTTTGGAGCAAACTACCGATTCTGCTGCCTGGGT 591 Query 6623 AGCTTTTTGGCTTCGACTACACTGCGTATGACGCCAGTCTCTCCCCTGTCTGGTTC 6678 ||| |||| ||| |||||| | | ||||| || |||||| ||| || |||||| Sbjct 592 CGCTCTTTGCCTTTGACTACTCAGGATATGATGCTAGTCTCAGCCCGGTATGGTTC 647 >seq945 Length=2018 Score = 116 bits (128), Expect = 2e-22 Identities = 344/527 (65%), Gaps = 9/527 (2%) Strand=Plus/Minus Query 886 GGGTCAAACATCCATTACACTAACATCAACTATTACGAGAACGC---TGCCTCTAACAGC 942 || || | ||| ||||||||| ||||||||||||| | || | ||| | | |||| Sbjct 1758 GGCTCCACCATTAATTACACTACCATCAACTATTACAAAGACTCCTATGCTGCGA-CAGC 1700 Query 943 CTTAACAAGCAGGACTTTACGCAAGACCCTGAGAAGTTTACTCGTCCGGTGGTTGATGTA 1002 | | ||| | | | ||||||||||| |||||| || || || || | Sbjct 1699 GGGTAAA--CAGAGCCTCAAACAAGACCCTGATAAGTTTGCTAACCCTGTCAAAGACATT 1642 Query 1003 ATGAAGGAAGCTGCAGTGCCACTCAAAAGTCCATCCGCTGAAGCGTGTGGTTATAGTGAC 1062 | | ||| || | |||||| || ||||||||||||||| |||||||| ||||| Sbjct 1641 TTCACTGAAATGGCTGCGCCACTGAAGTCTCCATCCGCTGAAGCTTGTGGTTACAGTGAT 1582 Query 1063 AGAGTAGCACAACTGACCCTCGGAAACTCCACCATTACCACTCAAGAGGCCGCGAATATT 1122 | || |||||||| ||| | || |||||||||||||| || || ||||| || || || Sbjct 1581 CGCGTGGCACAACTCACCATTGGGAACTCCACCATTACTACACAGGAGGCGGCAAACATC 1522 Query 1123 GTTGTGGCATACGGTAAATGGCCGGAGAAGTTGAGTGATTCTGATGCAACAGCGGTTGAC 1182 | || | |||||| | ||||| | | |||| || || |||||||| ||| Sbjct 1521 ATAGTCGGTTACGGTGAGTGGCCCTCATACTGCTCTGATGACGACGCCACAGCGGTGGAC 1462 Query 1183 CGACCAACTGAGCCAGGTGTTTCTGCCGAGCGCTTTTACACGCTCCCATCAGTGCAGTGG 1242 |||||| |||| |||||| | | | ||||| || || | | |||| Sbjct 1461 AAACCAACGCGCCCAGATGTTTCGGTGAATAGGTTTTATACACTGGACACTAAACTGTGG 1402 Query 1243 ACTACGACCTTTAAGGGAAGGTTCTGGAAGCTACCGGACGCGTTATCCCAGTTGGGGCTC 1302 | | | | |||||| ||| |||||| | || || | ||| | || || || Sbjct 1401 GAAAAGTCATCTAAGGGTTGGTATTGGAAGTTTCCTGATGTGTTGACTGAGACCGGAGTC 1342 Query 1303 TTTGGACAAAATTTGCAATTCCACTACCTGTACAGGGGTGGGTGGGCCATCCACGTCCAG 1362 ||||| || || || || ||||| |||| || |||| ||| || || || Sbjct 1341 TTTGGCCAGAACGCACAGTTTCACTATTTGTATAGATCAGGGTTTTGCATTCATGTGCAA 1282 Query 1363 TGCAACGCAACCAAGTTTCACCAGGGAACACTTCTTGTAGTCGCCAT 1409 || ||||| | |||||| || || ||| | || |||||||||| Sbjct 1281 TGTAACGCTAGCAAGTTCCATCAAGGAGC---GCTGTTAGTCGCCAT 1238 Score = 105 bits (116), Expect = 3e-19 Identities = 169/239 (71%), Gaps = 4/239 (2%) Strand=Plus/Minus Query 2041 GGTCCTCTGCAATCCACTCTTCTGGGTGTGTTCTCTCGGTATTACACCCAGTGGTCTGGG 2100 ||||| |||||| || | ||||| ||| | | ||||||||||||||||| ||| Sbjct 573 GGTCCATGGCAATCAACAATGCTGGGCCAACTCTGTGGATATTACACCCAGTGGTCAGGG 514 Query 2101 TCCATAGAGTTCACCTTCATGTTTTGCGGGACTTTCATGTCCACGGGCAAGGTTATAATC 2160 || | ||| |||| || |||||| |||| |||||||| |||| || || | | || Sbjct 513 TCACTGGAGGTCACTTTTATGTTTACCGGGTCTTTCATGGCCACAGGTAAAATGCTCATA 454 Query 2161 GCGTACACCCCACCTGGAGGCAC--AGCCCCCACATCGCGCCGAGAGGCGATGCTGGGGA 2218 || || || || ||||| ||| | ||| | |||| ||| | | || |||||||| | Sbjct 453 GCTTATACACCTCCTGGCGGCCCCTTACCCAAAGATCGGGCC-ACA-GCAATGCTGGGCA 396 Query 2219 CCCACATAGTTTGGGACTTTGGTCTACAATCCTCGATAACCCTTGTTGTCCCCTGGATC 2277 | || | | ||||| ||||| || ||||| || | |||||||| | || |||||| Sbjct 395 CACATGTTATCTGGGATTTTGGGCTGCAATCATCTGTTACCCTTGTAATACCATGGATC 337 >seq906 Length=2416 Score = 107 bits (118), Expect = 9e-20 Identities = 817/1301 (63%), Gaps = 42/1301 (3%) Strand=Plus/Plus Query 3460 GCTCACGGCCGCGACCAAATCGCACGCTGCCAATGTACAGCCGGGGTTTATTATTGCAAG 3519 ||||| ||| | || ||| ||||| || | ||| | | || || ||||||||||| Sbjct 195 GCTCAGGGCTGTGATACAATTGCACGTTGTGACTGTCAAACAGGAGTGTATTATTGCAAT 254 Query 3520 TCCAGAATGAAACATTACCCAGTGATCGTGACCCCACC-AGTCTTGTACAAAATCGGAGC 3578 |||| | || || || ||||| | | | | ||| || || || | | | ||| Sbjct 255 TCCAAGAGAAAGCACTATCCAGTCAGCTTTTCTAAACCCAGCCTCATATATG-TGGAAGC 313 Query 3579 TAGTGATTATTACCCAGAAAGGTATCAATCTCA--TGTTGCACTCGGAATCGGTTTCGCC 3636 ||| || |||||||| | || || ||||| || || ||| | | | || | | Sbjct 314 TAGCGAGTATTACCCTGCTAGATACCAATCGCACCTGATGC--TTGCAGCGGGCCACTCT 371 Query 3637 GAGCCCGGCGACTGTGGTGGTATACTACGGTGCCAGCATGGGGTTATGGGCATTCTTACT 3696 |||||||||||||| || || || || |||| || ||||| || | || || | | Sbjct 372 GAGCCCGGCGACTGCGGAGGCATCTTAAGGTGTCAACATGGTGTAGTTGGTATAGTGTCC 431 Query 3697 GCTGGCGGTAACAACATGGTCGCCTTCGCTGATGTGCGCCAATTGCTGTGGATTGAAGAC 3756 | || || ||| | || | || ||||||||| | | | ||||| | || || Sbjct 432 ACGGGTGGCAACGGGCTCGTTGGATTTGCTGATGTGAGGGATCTCTTGTGGTTAGATGAA 491 Query 3757 GATGTCATGGAGCAGGGCCTTACCGATAACGTCCAGAGCTTAGGTAACGCTTTTGGTGCT 3816 || | |||||||| || | |||| || | || | | ||| |||| ||||| | Sbjct 492 GAGGCTATGGAGCAAGGTGTGTCCGACTACATTAAGGGGCTCGGTGACGCGTTTGGAACA 551 Query 3817 GGATTTACTGATGAGATATCCAACTATGTGGGGCAGGTCAGGGACATGATGGTTGGTTCC 3876 || || ||||| | |||||| | || | | ||| || | | || || Sbjct 552 GGCTTCACTGAAGCTGTATCCAGGGAAGTTGAAGCCCTTAGGAACCACCTCATAGGATCT 611 Query 3877 GACACCGTTGTGGAGAGGGTAGTCGGGAACATTATAAAACTTTTGTCCGCCCTGGTGATT 3936 || | || |||| | | |||| |||| || || | || || | || ||| Sbjct 612 GATGGAGCGGTTGAGAAAATCCTAAAGAACCTTATTAAGCTGATTTCAGCGTTAGTAATT 671 Query 3937 GTTGTTAGAAACCGCAGCGACATCATTACTGTGACAGCAACCCTATCCTTGCTTGGGTGC 3996 || | || | | || || | || | |||||||| || || || |||| || Sbjct 672 GTGATCAGGAGCGATTATGATATGGTCACCCTCACAGCAACTTTAGCCCTGATTGGTTG- 730 Query 3997 TCA-GGCTCCCCTTGGCGCTGGCTTAAATCAAAGATTTGCTCGATCTTGGGTATTAACAT 4055 ||| || |||||| ||| ||||| | |||| || ||||| ||||| ||| Sbjct 731 TCACGGAAGTCCTTGGGCTTGGATTAAAGCCAAGACAGCATCCATCTTAGGTATCCCCAT 790 Query 4056 GGCACAGAAGCAGGCTGACGGCTGGGTTAAGAAGTTTACTGA---GGCAGTTAACGCCTT 4112 || ||||||||| || ||| | ||||| |||| ||| ||| | |||| Sbjct 791 CGCCCAGAAGCAGAGTGCTTCTTGGCTAAAGAAATTTAATGATATGGCGAGTGCCGCC-- 848 Query 4113 TAAGGGTTTGGACTGGATCGCTGCCAAGTTGTCCAAGTTCCTTGATTGGATCAAATCCAA 4172 |||||||| || ||||| | ||| | |||||| |||| ||| ||| || Sbjct 849 -AAGGGTTTAGAATGGATATCCAACAAAATTAGTAAGTTCATTGACTGGCTCAGGGAGAA 907 Query 4173 GATCATCCCGG-AGCTCAGAGAGAGAGCGGAGTTTGTTAAGAATCTTAGGCAGCTTCCTC 4231 ||| | || | ||| || |||| ||| || ||| | | ||| | | ||| | || | Sbjct 908 GATTGTTCCAGCAGCCAAG-GAGAAAGCAGAATTTTTAACCAATTTGAAGCAATTGCCAC 966 Query 4232 TTCTCGAGGCCCAGATCACCACTTTGGAGCACTCCAAC-CCTAATCAGGAGACCCAAGAA 4290 | | ||| ||||||||| | || ||||| ||| ||| | || ||| || ||| Sbjct 967 TGTTAGAGAACCAGATCACGAACTTAGAGCAGTCCGCTGCCTCA-CAAGAGGACCTTGAA 1025 Query 4291 CAGCTTTTCTCGAACGTCCAATACCTGGCACACCACTGTAGGAAGAACGCTCCGCTCTAT 4350 | || ||| || |||||| || || |||| | ||| | || | || Sbjct 1026 GCTATGTTTGGGAATGTGTCATACCTCGCCCATTTCTGTCGCAAGTTCCAACCATTATAC 1085 Query 4351 GCAGCGGAAGCCCGGAGAGTTTTCGCACTAGAGAAACGCGTCCTTGGAGCAA-----TGC 4405 || ||||||| | |||| | | |||||||| | | || ||| ||| Sbjct 1086 GCCACGGAAGCTAAGCGAGTCTATGTTCTAGAGAAGAGAAT-----GAACAACTACATGC 1140 Query 4406 AGTTCAAGACCAAGAATCGAATTGAACCTGTTTGCTGTTTGATCCATGGAA---CGCCGG 4462 ||||||||| ||| | || ||||||||||| || | | ||| | || | || | Sbjct 1141 AGTTCAAGAGCAAACACCGTATTGAACCTGTATG---TCTCATCATTAGAGGCTCACCAG 1197 Query 4463 GCACTGGTAAATCACTTGCCACGACTATTATTGGCAGGAAGATCGCTGA---GTACGAGA 4519 ||||||| || || ||||| || ||| |||| || || || || ||| | Sbjct 1198 GCACTGGAAAGTCCCTTGCGACCGGTATCATTGCTCGGGTCATAGCAGACAAGTATCACT 1257 Query 4520 ATAGCGGGGTCTATAGTTTGCCACCTGACCCAGACCACTTTGATGGCTACGCCGAGCAGG 4579 ||| | | || | || ||||| ||||| ||||| ||||| || || |||| | Sbjct 1258 CTAGTGTGTACTC-ACTT--CCACCAGACCCTGACCATTTTGACGGGTATAAACAGCAAG 1314 Query 4580 CAGTTGTAATTATGGATGATCTGCATCAGAACCCAGACGGCAAAGATATGAGCTTGTTTT 4639 || | |||||||||||||| ||| ||||| ||||||||||| ||| || |||| Sbjct 1315 TGGTCACAGTTATGGATGATCTGTGTCAAAACCCTGACGGCAAAGACATGTCATTATTTT 1374 Query 4640 GTCAGATGGTTTCCACCACCCCCTTCGTGGTTCCGATGGCTGCTCTCGAGGATAAAGGTA 4699 | |||||||| |||||| || | || |||||| ||||||| || ||||| | Sbjct 1375 GCCAGATGGTGTCCACCGTGGATTTTATCCCACCAATGGCTTCTCTCGAAGA-AAAGGGA 1433 Query 4700 GACT-TTTCACCTCCAAATATGTGCTGGCCTCAACAAATGC 4739 | | ||||| || |||| ||| | || || || || || Sbjct 1434 GTTTCCTTCACATCTAAATTTGTTATCGCATCCACCAACGC 1474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 23553810890968