Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20murrelli_20[genbank_20GCA_5F001447425.1_202015-11-24]
5,242 sequences; 49,016,728 total letters
Query= NC_029854.1
Length=7382
Score E
Sequences producing significant alignments: (Bits) Value
seq643 228 4e-56
seq906 201 5e-48
seq1144 154 7e-34
seq945 113 2e-21
>seq643
Length=7254
Score = 228 bits (252), Expect = 4e-56
Identities = 632/961 (66%), Gaps = 16/961 (2%)
Strand=Plus/Minus
Query 5717 TGTTTATGCCCGTAGGTGCTGTGAAAGACTACGGCTACTTGAACCTAGCAGGCAGACCGA 5776
||||| |||| || || | |||| | || || | |||||||| || | || |
Sbjct 1619 TGTTTGTGCCAGTTGGAGATGTGGTCCAGTATGGGTTTTTGAACCTTAGTGGTAAGCCCA 1560
Query 5777 CCCACCGTACGCTCATGTACAATTTCCCAACACGCGCAGGGCAATGTGGCGGTGTTGTAG 5836
| ||| | || | |||||||||||||||||| ||||| || ||||| ||||||||
Sbjct 1559 CTCACAGGACTATGATGTACAATTTCCCAACAAAAGCAGGACAGTGTGGTGGTGTTGTGA 1500
Query 5837 TTTCAATGGGCAAAATCATTGGGATTCACATCGGTGGAAACGGTGCACAGGGTTTCGCTG 5896
| | |||| ||| | |||||||| ||||| ||||| |||||| || |||||| |
Sbjct 1499 CTGCCGTGGGTAAAGTGATTGGGATCCACATTGGTGGCAACGGTAGGCAAGGTTTCTGCG 1440
Query 5897 CTGCACTGCTGCGCAGGTACTTCACACAGCCA-CAAGGTGAGATTGAGTTCATGGAAAAG 5955
|||| ||| | | | ||||| ||| | ||||||||||| | | ||| |
Sbjct 1439 CTGCCCTGAAGAGGGGATACTTTTG-CAGTGAACAAGGTGAGATCCAATGGATGAAGCCC 1381
Query 5956 AGCAAAGATGCGGGCTACCCCATCATTAATGCCCCCACCGAGACCAAGTTGCATCCCAGT 6015
| |||||| | ||| | ||| || | || || || ||| | | || |||
Sbjct 1380 AACAAAGAAACTGGCAGGTTGAACATCAACGGACCTACTCGCACAAAGCTTGAACCAAGT 1321
Query 6016 GTTTTCTTTGATGTTTTCTCTGGAGAAAAGGAACCCGCAGTACTACATAAGAAAGACCCC 6075
|| || ||||| ||| || || || || ||||| || || ||||||||
Sbjct 1320 GTCTTTCACGATGTGTTCGAAGGCACTAAAGAGCCAGCAGTGCTGACTAGTAAAGACCCA 1261
Query 6076 AGACTCGAGGTGAACTTCGAAGATGCACTTTTCTCCAAGTACATAGGAAATG---TTCAC 6132
|| || || || |||| ||| | || ||||| || || ||| | || || ||||
Sbjct 1260 AGGCTGGAAGTTGACTTTGAACAGGCTCTTTTTTCAAAATACGTGGGGAACACGCTTCAT 1201
Query 6133 AAACCTGTCACTGAG---GAGATGGAGATAGCAATTGATCATTATGCCAATCAGTTGAAG 6189
|||| | | ||| | | |||| || | ||||||||||| || | |||
Sbjct 1200 GAACCCGAC---GAGTTTGTCAAGGAGGCGGCCTTA---CATTATGCCAACCAACTCAAG 1147
Query 6190 CAGCTTAATATTGACCCCACTCCCATTAGCATGGAGGATGCCATTTATGGTACTGAGGGC 6249
||| | |||| | |||| || |||||||||||||| ||| || || ||| |
Sbjct 1146 CAGTTAGATATCAAGACCACCAAGATGAGCATGGAGGATGCATGTTACGGCACAGAGAAC 1087
Query 6250 CTGGAGGCGCTAGACCTTGGCACCAGCGCAGGTTACCCCTACGTGGCCCTAGGCATCAAG 6309
||||| || |||| ||| ||| || ||||| || || ||| || ||||||||||||
Sbjct 1086 CTGGAAGCTATAGATCTTCACACAAGTGCAGGATATCCATACAGTGCACTAGGCATCAAG 1027
Query 6310 AAAAGAGACATTTTAAATAAAGAGACTAGAGACGTGACCAAAATGAAGCAGTGTATCGAC 6369
|||| |||||||| || | ||| | || || | ||| ||||| | || |||
Sbjct 1026 AAAAAGGACATTTTGGATCCAACAACTCGCGATGTCAGCAAGATGAAATTCTACATGGAC 967
Query 6370 AAGTACGGTCTTAATCTGCCGATGGTC-ACCTATGTCAAAGATGAACTCAGATCCAAGGA 6428
||||| || | |||| ||| | || || ||||| ||||||||||| || ||| ||
Sbjct 966 AAGTATGGGTTGGATCTACCG-TACTCTACTTATGTTAAAGATGAACTTAGGGCCATCGA 908
Query 6429 GAAGGTGAAGAAGGGCAAGAGCAGACTCATTGAGGCGTCGAGTCTAAATGATTCTGTTGC 6488
||| | ||||| || ||| | ||||| || ||| || |||||||| || ||
Sbjct 907 CAAGATCAAGAAAGGGAAGTCTCGTCTCATAGAAGCGAGCAGCCTAAATGACTCAGTGTA 848
Query 6489 AATGCGCTGCGCCTTTGGCAACCTCTATAAGGCTTTCCACACCAACCCCGGCACCCTGAC 6548
|| | | ||||| |||| ||| | ||||||||| |||| || || || | ||
Sbjct 847 CTTGAGAATGACATTTGGGCACCTTTATGAAGCTTTCCACGCCAATCCAGGTACAATCAC 788
Query 6549 CGGATGCGCTGTGGGCTGCAATCCTGAGACTTTTTGGAGCAAGATACCAGTAATGATGGA 6608
||| | ||||| || ||||| || || || ||||||||| ||||| | | |
Sbjct 787 CGGTTCAGCTGTTGGGTGCAACCCAGATGTGTTCTGGAGCAAGTTACCAATTCTACTCCC 728
Query 6609 TGGTGAGTTGTTTGGCTTTGACTACACTGCGTACGATGCCAGCCTCTCACCAGTCTGGTT 6668
|| | | || | ||||||||| | | ||| || || || ||| ||||| |||||
Sbjct 727 AGGATCGCTTTTCGCGTTTGACTACTCGGGGTATGACGCTAGTCTCAGCCCAGTGTGGTT 668
Query 6669 C 6669
|
Sbjct 667 C 667
Score = 116 bits (128), Expect = 2e-22
Identities = 496/769 (64%), Gaps = 20/769 (3%)
Strand=Plus/Minus
Query 3982 GGGTGC-ACTGGATCGCCGTGGCGCTGGCTTAAGTCCAAGATTTGCTCCATCCTGGGAAT 4040
|||||| || ||| | || ||| |||| ||||||| |||| || || |||| ||
Sbjct 3342 GGGTGCCACGGGAGC-CCTTGGGCCTGGGTTAAGTCGAAGACAGCATCAATTTTGGGCAT 3284
Query 4041 CAACATGGCACAGAAGCAGGCGGATGGCTGGGTGAAGAAGTTCACTGAAGCGGTCAATGC 4100
||||| ||||||||| | ||| | |||||||||| || |||| | |||
Sbjct 3283 ACCGATGGCTCAGAAGCAGAGTGCCTCTTGGTTAAAGAAGTTCAACGATGCGGCGAGTGC 3224
Query 4101 CTTCAAGGGGCTGGACTGGATTGCCACAAAATTTTCTAAATTCCTTGATTGGATTAAATC 4160
| |||||||| || ||||| ||| ||| | |||||| | |||||| | ||
Sbjct 3223 CGCGAAGGGGCTTGAGTGGATCTCCAACAAAATCAGTAAATTTATCGATTGGCTCAAGGA 3164
Query 4161 CAAGATAATCCCTGAG--TTGAGGGAAAGAACTGAGTTTGTTAAAAATCTCAGGCAGCTC 4218
|| || || || | | || ||||| |||||| | || ||||| | ||| |||
Sbjct 3163 GAAAATCATACCGGCTGCTAAAGAGAAAGTC--GAGTTTCTAAACAATCTAAAGCAACTC 3106
Query 4219 CCACTCTTGGAGGCTCAGATTGCTACCCTTGAGCACTCAAACCCCAACCAAGAAACCCAG 4278
|| | |||||| || ||| ||| || || || ||| | || || ||
Sbjct 3105 CCCTTATTGGAGAACCAAATTTCTAATCTCGAACAGTCAGCAGCTTCGCAGGAGGACCTT 3046
Query 4279 GAGACCCTGTGTTCAAATGTGCAGTACCTAGCACATCATTGTAGAAAGAATGCA-CCGCT 4337
||| | ||| | || ||| ||||| || || || | || | | || || ||
Sbjct 3045 GAGGCGATGTTTGGCAACGTGTCTTACCTGGCCCACTTCTGCCGCAA-ATTCCAACCCCT 2987
Query 4338 CTATGCCGCGGAGGCGCGTCGCGTCTTTGCCTTGGAGAAGCGCGTGCTCGGAGCAATGCA 4397
||||||| |||| || | || | ||| | || ||| | || |||||
Sbjct 2986 CTATGCCACGGAAGCAAAGAGGGTGTACGCCCTAGAAAAGAGAATGAATAATTACATGCA 2927
Query 4398 GTTCAAGACCAAGAATCGAATTGAACCTGTTTGCTGCCTAATT--CAT-GGCACTCCTGG 4454
|||||||| ||| | || ||||||||||| ||| |||||| || ||| | |||||
Sbjct 2926 GTTCAAGAGCAAACACCGTATTGAACCTGTATGC---CTAATTATCAGAGGCTCGCCTGG 2870
Query 4455 TACTGGCAAATCACTTGCAACTACAATCATCGGTCGTAAGATCGCCGAATATGAGAACAG 4514
|||||| || ||| | ||||| || || | | | || || || | | ||
Sbjct 2869 TACTGGGAAGTCATTGGCAACAGGGATTATTGCTAGAGCCATAGCAGACAAGTACCACTC 2810
Query 4515 TGGTGTCTACAGCCTCCCACCCGACCCAGATCATTTCGACGGGTATGCTGAGCAAGCCGT 4574
|||| || | | || || |||||||| || || ||||| || | || |||
Sbjct 2809 CAGTGTGTATTCCTTACCTCCAGACCCAGACCACTTTGACGGATACAAACAACAGATCGT 2750
Query 4575 CGTAATCATGGATGA--TTTGCATCAAAACCCAGATGGGAAGGATATGAGTCTATTTTGC 4632
| | ||||| || | ||| ||||||||||| ||||| || ||| ||||||||
Sbjct 2749 CACTGTTATGGACGACCTATGC--CAAAACCCAGACGGGAAAGACATGTCACTATTTTGT 2692
Query 4633 CAGATGGTCTCCACAACACCATTCGTGGTGCCGATGGCTGCCTTGGAGGACAAGGGTAGG 4692
||||||||||||||| || | ||| ||||| | ||||||| ||||| ||
Sbjct 2691 CAGATGGTCTCCACAGTGGATTTTATACCGCCTATGGCATCTCTGGAGGAGAAGGG-AGT 2633
Query 4693 CT-TTTCACTTCCAAATATGTGCTTGCGTCCACGAATGCCAACCACATC 4740
|| ||||| ||||| | |||| |||| ||||| || |||| |||||
Sbjct 2632 CTCATTCACCTCCAAGTTTGTGATTGCCTCCACTAACGCCAGTAACATC 2584
Score = 98.7 bits (108), Expect = 5e-17
Identities = 145/200 (73%), Gaps = 18/200 (9%)
Strand=Plus/Minus
Query 495 AAGAGCCGATTGTGCTGGAGTGGTCTTCCTCCGGGGCCGTGAATGCTGCTAATCCTAACC 554
||||||| |||| ||| | |||| |||||||| || ||||||| ||||||||||||
Sbjct 6955 AAGAGCCTATTGAGCTAGC-TGGTAGTCCTCCGGCCCC-TGAATGCGGCTAATCCTAACT 6898
Query 555 TCCGAGCGTGTGCGCACAATCCAGT-GTTGCTACGTCGTAACGCGTAAGTTGGAGGCGGA 613
| |||| ||| ||| | ||||| | || | ||||||||| | || | | |||||
Sbjct 6897 GCGGAGCACATGCTCACGAACCAGTGGGTGGTGTGTCGTAACGGGCAACTCTGCAGCGGA 6838
Query 614 ACAGACTACTTTCGGCACCCCGTGTTTCCTTTATTTTATTCTTAT--------TTTATGG 665
|| ||||||||| || |||||||||| |||||||||||| ||||||
Sbjct 6837 ACCGACTACTTT-GGGTGTCCGTGTTTCC----TTTTATTCTTATATTGGCTGCTTATGG 6783
Query 666 TGACAATTGCAGAGATTTGT 685
||||||| || ||| ||||
Sbjct 6782 TGACAAT--CAAAGAGTTGT 6765
Score = 84.2 bits (92), Expect = 1e-12
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 2074 TACTACGCTCAGTGGTCCGGCTCCGTCGAGTTCACATTTATGTTTTGTGGCACCTTTATG 2133
|||||| | || ||||| || || | || |||| || ||||| || ||||||||
Sbjct 5345 TACTACACCCAATGGTCAGGATCACTGGAAGTCACCTTCATGTTCACCGGGTCCTTTATG 5286
Query 2134 ACCACTGGTAAGGTAATTATTGCCTACACACCACCCGGAGGCGACGCGCCTACAGA-CAG 2192
| || || ||| | | || || ||||||||||| |||||| | || | || | |
Sbjct 5285 GCTACCGGCAAGATGCTCATAGCATACACACCACCAGGAGGCCCCTTACCCAAGGACCGG 5226
Query 2193 AAGACAAGCAATGTTGGGAACGCACGTCGTTTGGGATTTCGGGCTTCAATCCAGCATCAC 2252
||| || |||||||| ||||||||| | ||||| || ||||| ||||| ||||
Sbjct 5225 GCGAC-CGCCATGTTGGGCACGCACGTCATCTGGGACTTTGGGCTGCAATCGTCTGTCAC 5167
Query 2253 CCTGGTAGTCCCGTGGAT 2270
||| ||| | || |||||
Sbjct 5166 CCTTGTAATACCATGGAT 5149
>seq906
Length=2416
Score = 201 bits (222), Expect = 5e-48
Identities = 746/1161 (64%), Gaps = 10/1161 (1%)
Strand=Plus/Plus
Query 3491 CAGGGGTGTACTATTGCAAATCCAGGGGAAAGCACTACCCAGTGGTGGTCACCCCGCCCA 3550
|||| ||||| |||||||| |||| | |||||||||| ||||| | | ||||
Sbjct 235 CAGGAGTGTATTATTGCAATTCCAAGAGAAAGCACTATCCAGTCAGCTTTTCTAAACCCA 294
Query 3551 GCCTTGCGCACATTGACAAG--AACGACTATTACCCTGAGAGATATCAATCTCACGTGGC 3608
|||| | | || ||| | ||| |||||||||| ||||| ||||| ||| ||
Sbjct 295 GCCT--CATATATGTGGAAGCTAGCGAGTATTACCCTGCTAGATACCAATCGCACCTGAT 352
Query 3609 GCTCGGAATCGGCTTTGCCGAGCCGGGCGACTGCGGGGGTCTGCTTAGGTGCCAGCACGG 3668
||| | | ||| | ||||| ||||||||||| || | | ||||| || || ||
Sbjct 353 GCTTGCAGCGGGCCACTCTGAGCCCGGCGACTGCGGAGGCATCTTAAGGTGTCAACATGG 412
Query 3669 TGTGATGGGCATTCTGACCGCAGGCGGCAACAACCTAGTGGCGTTTGCAGATGTTCGAGA 3728
||| | || || || || | || |||||| || || | ||||| ||||| | ||
Sbjct 413 TGTAGTTGGTATAGTGTCCACGGGTGGCAACGGGCTCGTTGGATTTGCTGATGTGAGGGA 472
Query 3729 CCTGTTGTGGATTGAAGACGACGTGATGGAACAAGGCCTCACCGACTACGTGCAGAGTCT 3788
|| |||||| | || || || | ||||| ||||| | |||||||| | || | ||
Sbjct 473 TCTCTTGTGGTTAGATGAAGAGGCTATGGAGCAAGGTGTGTCCGACTACATTAAGGGGCT 532
Query 3789 TGGAAATGCCTTTGGTGCTGGCTTCACTGATGAAATTGCAAACTATGTTGGTCAGGTCAG 3848
|| | || ||||| | ||||||||||| | | | | | |||| | ||
Sbjct 533 CGGTGACGCGTTTGGAACAGGCTTCACTGAAGCTGTATCCAGGGAAGTTGAAGCCCTTAG 592
Query 3849 GGACATGATGGTCGGCAGTGACACTGTGGTAGAGAAGATAGTGAGGAATATAATCAAGCT 3908
| || | | || ||| | ||| ||||| || | | ||| | || |||||
Sbjct 593 GAACCACCTCATAGGATCTGATGGAGCGGTTGAGAAAATCCTAAAGAACCTTATTAAGCT 652
Query 3909 CCTGTCGGCCTTAGTCATTGTGGTTAGGAACCGTAGTGATATCATAACAGTTACAGCCAC 3968
| || || ||||| |||||| | |||| | | |||||| | || | ||||| ||
Sbjct 653 GATTTCAGCGTTAGTAATTGTGATCAGGAGCGATTATGATATGGTCACCCTCACAGCAAC 712
Query 3969 CCTATCTTTACTTGGGTG-CACTGGATCGCCGTGGCGCTGGCTTAAGTCCAAGATTTGCT 4027
|| | | |||| || ||| ||| || ||| ||| |||| |||||| |
Sbjct 713 TTTAGCCCTGATTGGTTGTCAC-GGAAGTCCTTGGGCTTGGATTAAAGCCAAGACAGCAT 771
Query 4028 CCATCCTGGGAATCAACATGGCACAGAAGCAGGCGGATGGCTGGGTGAAGAAGTTCACTG 4087
||||| | || ||| ||| || ||||||||| | | ||| | ||||| || | ||
Sbjct 772 CCATCTTAGGTATCCCCATCGCCCAGAAGCAGAGTGCTTCTTGGCTAAAGAAATTTAATG 831
Query 4088 AAGCGGTCAATGCCTTCAAGGGGCTGGACTGGATTGCCACAAAATTTTCTAAATTCCTTG 4147
| || | |||| |||||| | || ||||| ||| ||| || ||| ||| |||
Sbjct 832 ATATGGCGAGTGCCGCCAAGGGTTTAGAATGGATATCCAACAAAATTAGTAAGTTCATTG 891
Query 4148 ATTGGATTAAATCCAAGATAATCCCTG-AGTTGAGG-GAAAGAACTGAGTTTGTTAAAAA 4205
| ||| | | ||||| | || | || ||| ||||| | || ||| | | ||
Sbjct 892 ACTGGCTCAGGGAGAAGATTGTTCCAGCAGCCAAGGAGAAAGCA--GAATTTTTAACCAA 949
Query 4206 TCTCAGGCAGCTCCCACTCTTGGAGGCTCAGATTGCTACCCTTGAGCACTCAAACCCCAA 4265
| | | ||| | ||||| || ||| ||||| | | | | ||||| || ||
Sbjct 950 TTTGAAGCAATTGCCACTGTTAGAGAACCAGATCACGAACTTAGAGCAGTCCGCTGCCTC 1009
Query 4266 CCAAGAAACCCAGGAGACCCTGTGTTCAAATGTGCAGTACCTAGCACATCATTGTAGAAA 4325
||||| || || | ||| | |||||| ||||| || ||| ||| | ||
Sbjct 1010 ACAAGAGGACCTTGAAGCTATGTTTGGGAATGTGTCATACCTCGCCCATTTCTGTCGCAA 1069
Query 4326 GAATGCACCGCTCTATGCCGCGGAGGCGCGTCGCGTCTTTGCCTTGGAGAAGCGCGTGCT 4385
| ||| | || ||| |||| || || |||| || | |||||| | ||
Sbjct 1070 GTTCCAACCATTATACGCCACGGAAGCTAAGCGAGTCTATGTTCTAGAGAAGAGAATGAA 1129
Query 4386 CGGAGCAATGCAGTTCAAGACCAAGAATCGAATTGAACCTGTTTGCTGCCTAATTCATGG 4445
| ||||||||||||| ||| | || ||||||||||| || | | ||| ||
Sbjct 1130 CAACTACATGCAGTTCAAGAGCAAACACCGTATTGAACCTGTATGTCTCATCATTAGAGG 1189
Query 4446 CACTCCTGGTACTGGCAAATCACTTGCAACTACAATCATCGGTCGTAAGATCGCCGAATA 4505
| | || || ||||| || || ||||| || ||||| | ||| || || || |
Sbjct 1190 CTCACCAGGCACTGGAAAGTCCCTTGCGACCGGTATCATTGCTCGGGTCATAGCAGACAA 1249
Query 4506 TGAGAACAGTGGTGTCTACAGCCTCCCACCCGACCCAGATCATTTCGACGGGTATGCTGA 4565
| || | |||| ||| || ||||| ||||| || ||||| ||||||||| |
Sbjct 1250 GTATCACTCTAGTGTGTACTCACTTCCACCAGACCCTGACCATTTTGACGGGTATAAACA 1309
Query 4566 GCAAGCCGTCGTAATCATGGATGATTTGCATCAAAACCCAGATGGGAAGGATATGAGTCT 4625
||||| ||| | | ||||||||| || ||||||||| || || || || ||| |
Sbjct 1310 GCAAGTGGTCACAGTTATGGATGATCTGTGTCAAAACCCTGACGGCAAAGACATGTCATT 1369
Query 4626 ATTTTGCCAGATGGTCTCCAC 4646
||||||||||||||| |||||
Sbjct 1370 ATTTTGCCAGATGGTGTCCAC 1390
>seq1144
Length=1302
Score = 154 bits (170), Expect = 7e-34
Identities = 424/635 (67%), Gaps = 16/635 (3%)
Strand=Plus/Plus
Query 6043 AAGGAACCCGCAGTACTACATAAG-AAAGACCCCAGACTCGAGGTGAACTTCGAAGATGC 6101
|||||||| ||||| || | ||| |||||||| ||| | ||||| |||| ||| | ||
Sbjct 21 AAGGAACCAGCAGTTTTA-ACAAGTAAAGACCCTAGATTGGAGGTCGACTTTGAACAAGC 79
Query 6102 ACTTTTCTCCAAGTACATAGGAAATGTT---CACAAACCTG-TCACTGAGGAGA-TGGAG 6156
|| || |||||||| | || |||||| ||| | || | | | | | | || | ||
Sbjct 80 CCTGTTTTCCAAGTATGTGGGCAATGTTTTACACGAGCCCGATGAAT-ATGTGACTCAAG 138
Query 6157 ATAGCAATTGATCATTATGCCAATCAGTTGAAGCAGCTTAATATTGACCCCACTCCCATT 6216
| || | || || || ||||| | || || | | || || | | ||
Sbjct 139 CT-GCCCTC---CACTACGCGAATCAACTTAAACAATTGGACATAAACACTAGCAAGATG 194
Query 6217 AGCATGGAGGATGCCATTTATGGTACTGAGGGCCTGGAGGCGCTAGACCTTGGCACCAGC 6276
||||||||||| || ||||| ||||| ||||||||| | ||||| |||| ||
Sbjct 195 AGCATGGAGGAAGCGTGCTATGGCACTGAAAACCTGGAGGCAATTGACCTCTGCACTAGT 254
Query 6277 GCAGGTTACCCCTACGTGGCCCTAGGCATCAAGAAAAGAGACATT-TTAAATAAAGAGAC 6335
|| || ||||| ||| ||||| ||||||||||||||||||||| || | | | ||
Sbjct 255 GCCGGGTACCCATACAGCGCCCTTGGCATCAAGAAAAGAGACATTCTTGACCCCACA-AC 313
Query 6336 TAGAGACGTGACCAAAATGAAGCAGTGTATCGACAAGTACGGTCTTAATCTGCCGATGGT 6395
|| || ||| | || ||||| | ||| || || ||||| || ||||||| || |
Sbjct 314 CAGGGATGTGTCTAAGATGAAATTCTATATGGATAAATACGGGCTAGATCTGCC-ATACT 372
Query 6396 C-ACCTATGTCAAAGATGAACTCAGATCCAAGGAGAAGGTGAAGAAGGGCAAGAGCAGAC 6454
| |||||||| || ||||| || || ||| ||| || | ||||| || ||| |
Sbjct 373 CTACCTATGTGAAGGATGAGCTTAGGTCCCTGGATAAAATCAAGAAAGGAAAGTCACGCT 432
Query 6455 TCATTGAGGCGTCGAGTCTAAATGATTCTGTTGCAATGCGCTGCGCCTTTGGCAACCTCT 6514
| || ||||| || | ||||| ||||| | | || ||||| |||| |
Sbjct 433 TGATAGAGGCTAGTAGCTTGAATGACTCTGTCTACCTCAGAATGGCTTTTGGGCACCTTT 492
Query 6515 ATAAGGCTTTCCACACCAACCCCGGCACCCTGACCGGATGCGCTGTGGGCTGCAATCCTG 6574
|| |||| || || | ||||| ||||| |||| || | || ||||| || || || |
Sbjct 493 ATGAGGCGTTTCATGCTAACCCTGGCACTGTGACTGGCTCAGCAGTGGGTTGTAACCCGG 552
Query 6575 AGACTTTTTGGAGCAAGATACCAGTAATGATGGATGGTGAGTTGTTTGGCTTTGACTACA 6634
| ||||||||||| |||| | || || ||| | | |||| ||||||||||
Sbjct 553 ACGTGTTTTGGAGCAAACTACCGATTCTGCTGCCTGGGTCGCTCTTTGCCTTTGACTACT 612
Query 6635 CTGCGTACGATGCCAGCCTCTCACCAGTCTGGTTC 6669
| | || ||||| || ||| || || ||||||
Sbjct 613 CAGGATATGATGCTAGTCTCAGCCCGGTATGGTTC 647
>seq945
Length=2018
Score = 113 bits (124), Expect = 2e-21
Identities = 127/170 (75%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 1015 CCGCTCAAGTCCCCCTCCGCCGAGGCGTGTGGGTACAGTGATAGAGTAGCTCAGCTCACC 1074
|| || ||||| || ||||| || || ||||| ||||||||| | || || || ||||||
Sbjct 1623 CCACTGAAGTCTCCATCCGCTGAAGCTTGTGGTTACAGTGATCGCGTGGCACAACTCACC 1564
Query 1075 CTCGGCAACTCCACAATCACTACACAAGAAGCTGCCAACATTGTCGTGGGATATGGGCGC 1134
| || |||||||| || |||||||| || || || ||||| | || || || ||
Sbjct 1563 ATTGGGAACTCCACCATTACTACACAGGAGGCGGCAAACATCATAGTCGGTTACGGTGAG 1504
Query 1135 TGGCCCCAGTTCCGGAGTGATTGCGACGCCACAGCGGTGGATAAACCAAC 1184
|||||| | | | |||| |||||||||||||||||| ||||||||
Sbjct 1503 TGGCCCTCATACTGCTCTGATGACGACGCCACAGCGGTGGACAAACCAAC 1454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 23505813721648
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