Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20murrelli_20[genbank_20GCA_5F001447425.1_202015-11-24] 5,242 sequences; 49,016,728 total letters Query= NC_029854.1 Length=7382 Score E Sequences producing significant alignments: (Bits) Value seq643 228 4e-56 seq906 201 5e-48 seq1144 154 7e-34 seq945 113 2e-21 >seq643 Length=7254 Score = 228 bits (252), Expect = 4e-56 Identities = 632/961 (66%), Gaps = 16/961 (2%) Strand=Plus/Minus Query 5717 TGTTTATGCCCGTAGGTGCTGTGAAAGACTACGGCTACTTGAACCTAGCAGGCAGACCGA 5776 ||||| |||| || || | |||| | || || | |||||||| || | || | Sbjct 1619 TGTTTGTGCCAGTTGGAGATGTGGTCCAGTATGGGTTTTTGAACCTTAGTGGTAAGCCCA 1560 Query 5777 CCCACCGTACGCTCATGTACAATTTCCCAACACGCGCAGGGCAATGTGGCGGTGTTGTAG 5836 | ||| | || | |||||||||||||||||| ||||| || ||||| |||||||| Sbjct 1559 CTCACAGGACTATGATGTACAATTTCCCAACAAAAGCAGGACAGTGTGGTGGTGTTGTGA 1500 Query 5837 TTTCAATGGGCAAAATCATTGGGATTCACATCGGTGGAAACGGTGCACAGGGTTTCGCTG 5896 | | |||| ||| | |||||||| ||||| ||||| |||||| || |||||| | Sbjct 1499 CTGCCGTGGGTAAAGTGATTGGGATCCACATTGGTGGCAACGGTAGGCAAGGTTTCTGCG 1440 Query 5897 CTGCACTGCTGCGCAGGTACTTCACACAGCCA-CAAGGTGAGATTGAGTTCATGGAAAAG 5955 |||| ||| | | | ||||| ||| | ||||||||||| | | ||| | Sbjct 1439 CTGCCCTGAAGAGGGGATACTTTTG-CAGTGAACAAGGTGAGATCCAATGGATGAAGCCC 1381 Query 5956 AGCAAAGATGCGGGCTACCCCATCATTAATGCCCCCACCGAGACCAAGTTGCATCCCAGT 6015 | |||||| | ||| | ||| || | || || || ||| | | || ||| Sbjct 1380 AACAAAGAAACTGGCAGGTTGAACATCAACGGACCTACTCGCACAAAGCTTGAACCAAGT 1321 Query 6016 GTTTTCTTTGATGTTTTCTCTGGAGAAAAGGAACCCGCAGTACTACATAAGAAAGACCCC 6075 || || ||||| ||| || || || || ||||| || || |||||||| Sbjct 1320 GTCTTTCACGATGTGTTCGAAGGCACTAAAGAGCCAGCAGTGCTGACTAGTAAAGACCCA 1261 Query 6076 AGACTCGAGGTGAACTTCGAAGATGCACTTTTCTCCAAGTACATAGGAAATG---TTCAC 6132 || || || || |||| ||| | || ||||| || || ||| | || || |||| Sbjct 1260 AGGCTGGAAGTTGACTTTGAACAGGCTCTTTTTTCAAAATACGTGGGGAACACGCTTCAT 1201 Query 6133 AAACCTGTCACTGAG---GAGATGGAGATAGCAATTGATCATTATGCCAATCAGTTGAAG 6189 |||| | | ||| | | |||| || | ||||||||||| || | ||| Sbjct 1200 GAACCCGAC---GAGTTTGTCAAGGAGGCGGCCTTA---CATTATGCCAACCAACTCAAG 1147 Query 6190 CAGCTTAATATTGACCCCACTCCCATTAGCATGGAGGATGCCATTTATGGTACTGAGGGC 6249 ||| | |||| | |||| || |||||||||||||| ||| || || ||| | Sbjct 1146 CAGTTAGATATCAAGACCACCAAGATGAGCATGGAGGATGCATGTTACGGCACAGAGAAC 1087 Query 6250 CTGGAGGCGCTAGACCTTGGCACCAGCGCAGGTTACCCCTACGTGGCCCTAGGCATCAAG 6309 ||||| || |||| ||| ||| || ||||| || || ||| || |||||||||||| Sbjct 1086 CTGGAAGCTATAGATCTTCACACAAGTGCAGGATATCCATACAGTGCACTAGGCATCAAG 1027 Query 6310 AAAAGAGACATTTTAAATAAAGAGACTAGAGACGTGACCAAAATGAAGCAGTGTATCGAC 6369 |||| |||||||| || | ||| | || || | ||| ||||| | || ||| Sbjct 1026 AAAAAGGACATTTTGGATCCAACAACTCGCGATGTCAGCAAGATGAAATTCTACATGGAC 967 Query 6370 AAGTACGGTCTTAATCTGCCGATGGTC-ACCTATGTCAAAGATGAACTCAGATCCAAGGA 6428 ||||| || | |||| ||| | || || ||||| ||||||||||| || ||| || Sbjct 966 AAGTATGGGTTGGATCTACCG-TACTCTACTTATGTTAAAGATGAACTTAGGGCCATCGA 908 Query 6429 GAAGGTGAAGAAGGGCAAGAGCAGACTCATTGAGGCGTCGAGTCTAAATGATTCTGTTGC 6488 ||| | ||||| || ||| | ||||| || ||| || |||||||| || || Sbjct 907 CAAGATCAAGAAAGGGAAGTCTCGTCTCATAGAAGCGAGCAGCCTAAATGACTCAGTGTA 848 Query 6489 AATGCGCTGCGCCTTTGGCAACCTCTATAAGGCTTTCCACACCAACCCCGGCACCCTGAC 6548 || | | ||||| |||| ||| | ||||||||| |||| || || || | || Sbjct 847 CTTGAGAATGACATTTGGGCACCTTTATGAAGCTTTCCACGCCAATCCAGGTACAATCAC 788 Query 6549 CGGATGCGCTGTGGGCTGCAATCCTGAGACTTTTTGGAGCAAGATACCAGTAATGATGGA 6608 ||| | ||||| || ||||| || || || ||||||||| ||||| | | | Sbjct 787 CGGTTCAGCTGTTGGGTGCAACCCAGATGTGTTCTGGAGCAAGTTACCAATTCTACTCCC 728 Query 6609 TGGTGAGTTGTTTGGCTTTGACTACACTGCGTACGATGCCAGCCTCTCACCAGTCTGGTT 6668 || | | || | ||||||||| | | ||| || || || ||| ||||| ||||| Sbjct 727 AGGATCGCTTTTCGCGTTTGACTACTCGGGGTATGACGCTAGTCTCAGCCCAGTGTGGTT 668 Query 6669 C 6669 | Sbjct 667 C 667 Score = 116 bits (128), Expect = 2e-22 Identities = 496/769 (64%), Gaps = 20/769 (3%) Strand=Plus/Minus Query 3982 GGGTGC-ACTGGATCGCCGTGGCGCTGGCTTAAGTCCAAGATTTGCTCCATCCTGGGAAT 4040 |||||| || ||| | || ||| |||| ||||||| |||| || || |||| || Sbjct 3342 GGGTGCCACGGGAGC-CCTTGGGCCTGGGTTAAGTCGAAGACAGCATCAATTTTGGGCAT 3284 Query 4041 CAACATGGCACAGAAGCAGGCGGATGGCTGGGTGAAGAAGTTCACTGAAGCGGTCAATGC 4100 ||||| ||||||||| | ||| | |||||||||| || |||| | ||| Sbjct 3283 ACCGATGGCTCAGAAGCAGAGTGCCTCTTGGTTAAAGAAGTTCAACGATGCGGCGAGTGC 3224 Query 4101 CTTCAAGGGGCTGGACTGGATTGCCACAAAATTTTCTAAATTCCTTGATTGGATTAAATC 4160 | |||||||| || ||||| ||| ||| | |||||| | |||||| | || Sbjct 3223 CGCGAAGGGGCTTGAGTGGATCTCCAACAAAATCAGTAAATTTATCGATTGGCTCAAGGA 3164 Query 4161 CAAGATAATCCCTGAG--TTGAGGGAAAGAACTGAGTTTGTTAAAAATCTCAGGCAGCTC 4218 || || || || | | || ||||| |||||| | || ||||| | ||| ||| Sbjct 3163 GAAAATCATACCGGCTGCTAAAGAGAAAGTC--GAGTTTCTAAACAATCTAAAGCAACTC 3106 Query 4219 CCACTCTTGGAGGCTCAGATTGCTACCCTTGAGCACTCAAACCCCAACCAAGAAACCCAG 4278 || | |||||| || ||| ||| || || || ||| | || || || Sbjct 3105 CCCTTATTGGAGAACCAAATTTCTAATCTCGAACAGTCAGCAGCTTCGCAGGAGGACCTT 3046 Query 4279 GAGACCCTGTGTTCAAATGTGCAGTACCTAGCACATCATTGTAGAAAGAATGCA-CCGCT 4337 ||| | ||| | || ||| ||||| || || || | || | | || || || Sbjct 3045 GAGGCGATGTTTGGCAACGTGTCTTACCTGGCCCACTTCTGCCGCAA-ATTCCAACCCCT 2987 Query 4338 CTATGCCGCGGAGGCGCGTCGCGTCTTTGCCTTGGAGAAGCGCGTGCTCGGAGCAATGCA 4397 ||||||| |||| || | || | ||| | || ||| | || ||||| Sbjct 2986 CTATGCCACGGAAGCAAAGAGGGTGTACGCCCTAGAAAAGAGAATGAATAATTACATGCA 2927 Query 4398 GTTCAAGACCAAGAATCGAATTGAACCTGTTTGCTGCCTAATT--CAT-GGCACTCCTGG 4454 |||||||| ||| | || ||||||||||| ||| |||||| || ||| | ||||| Sbjct 2926 GTTCAAGAGCAAACACCGTATTGAACCTGTATGC---CTAATTATCAGAGGCTCGCCTGG 2870 Query 4455 TACTGGCAAATCACTTGCAACTACAATCATCGGTCGTAAGATCGCCGAATATGAGAACAG 4514 |||||| || ||| | ||||| || || | | | || || || | | || Sbjct 2869 TACTGGGAAGTCATTGGCAACAGGGATTATTGCTAGAGCCATAGCAGACAAGTACCACTC 2810 Query 4515 TGGTGTCTACAGCCTCCCACCCGACCCAGATCATTTCGACGGGTATGCTGAGCAAGCCGT 4574 |||| || | | || || |||||||| || || ||||| || | || ||| Sbjct 2809 CAGTGTGTATTCCTTACCTCCAGACCCAGACCACTTTGACGGATACAAACAACAGATCGT 2750 Query 4575 CGTAATCATGGATGA--TTTGCATCAAAACCCAGATGGGAAGGATATGAGTCTATTTTGC 4632 | | ||||| || | ||| ||||||||||| ||||| || ||| |||||||| Sbjct 2749 CACTGTTATGGACGACCTATGC--CAAAACCCAGACGGGAAAGACATGTCACTATTTTGT 2692 Query 4633 CAGATGGTCTCCACAACACCATTCGTGGTGCCGATGGCTGCCTTGGAGGACAAGGGTAGG 4692 ||||||||||||||| || | ||| ||||| | ||||||| ||||| || Sbjct 2691 CAGATGGTCTCCACAGTGGATTTTATACCGCCTATGGCATCTCTGGAGGAGAAGGG-AGT 2633 Query 4693 CT-TTTCACTTCCAAATATGTGCTTGCGTCCACGAATGCCAACCACATC 4740 || ||||| ||||| | |||| |||| ||||| || |||| ||||| Sbjct 2632 CTCATTCACCTCCAAGTTTGTGATTGCCTCCACTAACGCCAGTAACATC 2584 Score = 98.7 bits (108), Expect = 5e-17 Identities = 145/200 (73%), Gaps = 18/200 (9%) Strand=Plus/Minus Query 495 AAGAGCCGATTGTGCTGGAGTGGTCTTCCTCCGGGGCCGTGAATGCTGCTAATCCTAACC 554 ||||||| |||| ||| | |||| |||||||| || ||||||| |||||||||||| Sbjct 6955 AAGAGCCTATTGAGCTAGC-TGGTAGTCCTCCGGCCCC-TGAATGCGGCTAATCCTAACT 6898 Query 555 TCCGAGCGTGTGCGCACAATCCAGT-GTTGCTACGTCGTAACGCGTAAGTTGGAGGCGGA 613 | |||| ||| ||| | ||||| | || | ||||||||| | || | | ||||| Sbjct 6897 GCGGAGCACATGCTCACGAACCAGTGGGTGGTGTGTCGTAACGGGCAACTCTGCAGCGGA 6838 Query 614 ACAGACTACTTTCGGCACCCCGTGTTTCCTTTATTTTATTCTTAT--------TTTATGG 665 || ||||||||| || |||||||||| |||||||||||| |||||| Sbjct 6837 ACCGACTACTTT-GGGTGTCCGTGTTTCC----TTTTATTCTTATATTGGCTGCTTATGG 6783 Query 666 TGACAATTGCAGAGATTTGT 685 ||||||| || ||| |||| Sbjct 6782 TGACAAT--CAAAGAGTTGT 6765 Score = 84.2 bits (92), Expect = 1e-12 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 2074 TACTACGCTCAGTGGTCCGGCTCCGTCGAGTTCACATTTATGTTTTGTGGCACCTTTATG 2133 |||||| | || ||||| || || | || |||| || ||||| || |||||||| Sbjct 5345 TACTACACCCAATGGTCAGGATCACTGGAAGTCACCTTCATGTTCACCGGGTCCTTTATG 5286 Query 2134 ACCACTGGTAAGGTAATTATTGCCTACACACCACCCGGAGGCGACGCGCCTACAGA-CAG 2192 | || || ||| | | || || ||||||||||| |||||| | || | || | | Sbjct 5285 GCTACCGGCAAGATGCTCATAGCATACACACCACCAGGAGGCCCCTTACCCAAGGACCGG 5226 Query 2193 AAGACAAGCAATGTTGGGAACGCACGTCGTTTGGGATTTCGGGCTTCAATCCAGCATCAC 2252 ||| || |||||||| ||||||||| | ||||| || ||||| ||||| |||| Sbjct 5225 GCGAC-CGCCATGTTGGGCACGCACGTCATCTGGGACTTTGGGCTGCAATCGTCTGTCAC 5167 Query 2253 CCTGGTAGTCCCGTGGAT 2270 ||| ||| | || ||||| Sbjct 5166 CCTTGTAATACCATGGAT 5149 >seq906 Length=2416 Score = 201 bits (222), Expect = 5e-48 Identities = 746/1161 (64%), Gaps = 10/1161 (1%) Strand=Plus/Plus Query 3491 CAGGGGTGTACTATTGCAAATCCAGGGGAAAGCACTACCCAGTGGTGGTCACCCCGCCCA 3550 |||| ||||| |||||||| |||| | |||||||||| ||||| | | |||| Sbjct 235 CAGGAGTGTATTATTGCAATTCCAAGAGAAAGCACTATCCAGTCAGCTTTTCTAAACCCA 294 Query 3551 GCCTTGCGCACATTGACAAG--AACGACTATTACCCTGAGAGATATCAATCTCACGTGGC 3608 |||| | | || ||| | ||| |||||||||| ||||| ||||| ||| || Sbjct 295 GCCT--CATATATGTGGAAGCTAGCGAGTATTACCCTGCTAGATACCAATCGCACCTGAT 352 Query 3609 GCTCGGAATCGGCTTTGCCGAGCCGGGCGACTGCGGGGGTCTGCTTAGGTGCCAGCACGG 3668 ||| | | ||| | ||||| ||||||||||| || | | ||||| || || || Sbjct 353 GCTTGCAGCGGGCCACTCTGAGCCCGGCGACTGCGGAGGCATCTTAAGGTGTCAACATGG 412 Query 3669 TGTGATGGGCATTCTGACCGCAGGCGGCAACAACCTAGTGGCGTTTGCAGATGTTCGAGA 3728 ||| | || || || || | || |||||| || || | ||||| ||||| | || Sbjct 413 TGTAGTTGGTATAGTGTCCACGGGTGGCAACGGGCTCGTTGGATTTGCTGATGTGAGGGA 472 Query 3729 CCTGTTGTGGATTGAAGACGACGTGATGGAACAAGGCCTCACCGACTACGTGCAGAGTCT 3788 || |||||| | || || || | ||||| ||||| | |||||||| | || | || Sbjct 473 TCTCTTGTGGTTAGATGAAGAGGCTATGGAGCAAGGTGTGTCCGACTACATTAAGGGGCT 532 Query 3789 TGGAAATGCCTTTGGTGCTGGCTTCACTGATGAAATTGCAAACTATGTTGGTCAGGTCAG 3848 || | || ||||| | ||||||||||| | | | | | |||| | || Sbjct 533 CGGTGACGCGTTTGGAACAGGCTTCACTGAAGCTGTATCCAGGGAAGTTGAAGCCCTTAG 592 Query 3849 GGACATGATGGTCGGCAGTGACACTGTGGTAGAGAAGATAGTGAGGAATATAATCAAGCT 3908 | || | | || ||| | ||| ||||| || | | ||| | || ||||| Sbjct 593 GAACCACCTCATAGGATCTGATGGAGCGGTTGAGAAAATCCTAAAGAACCTTATTAAGCT 652 Query 3909 CCTGTCGGCCTTAGTCATTGTGGTTAGGAACCGTAGTGATATCATAACAGTTACAGCCAC 3968 | || || ||||| |||||| | |||| | | |||||| | || | ||||| || Sbjct 653 GATTTCAGCGTTAGTAATTGTGATCAGGAGCGATTATGATATGGTCACCCTCACAGCAAC 712 Query 3969 CCTATCTTTACTTGGGTG-CACTGGATCGCCGTGGCGCTGGCTTAAGTCCAAGATTTGCT 4027 || | | |||| || ||| ||| || ||| ||| |||| |||||| | Sbjct 713 TTTAGCCCTGATTGGTTGTCAC-GGAAGTCCTTGGGCTTGGATTAAAGCCAAGACAGCAT 771 Query 4028 CCATCCTGGGAATCAACATGGCACAGAAGCAGGCGGATGGCTGGGTGAAGAAGTTCACTG 4087 ||||| | || ||| ||| || ||||||||| | | ||| | ||||| || | || Sbjct 772 CCATCTTAGGTATCCCCATCGCCCAGAAGCAGAGTGCTTCTTGGCTAAAGAAATTTAATG 831 Query 4088 AAGCGGTCAATGCCTTCAAGGGGCTGGACTGGATTGCCACAAAATTTTCTAAATTCCTTG 4147 | || | |||| |||||| | || ||||| ||| ||| || ||| ||| ||| Sbjct 832 ATATGGCGAGTGCCGCCAAGGGTTTAGAATGGATATCCAACAAAATTAGTAAGTTCATTG 891 Query 4148 ATTGGATTAAATCCAAGATAATCCCTG-AGTTGAGG-GAAAGAACTGAGTTTGTTAAAAA 4205 | ||| | | ||||| | || | || ||| ||||| | || ||| | | || Sbjct 892 ACTGGCTCAGGGAGAAGATTGTTCCAGCAGCCAAGGAGAAAGCA--GAATTTTTAACCAA 949 Query 4206 TCTCAGGCAGCTCCCACTCTTGGAGGCTCAGATTGCTACCCTTGAGCACTCAAACCCCAA 4265 | | | ||| | ||||| || ||| ||||| | | | | ||||| || || Sbjct 950 TTTGAAGCAATTGCCACTGTTAGAGAACCAGATCACGAACTTAGAGCAGTCCGCTGCCTC 1009 Query 4266 CCAAGAAACCCAGGAGACCCTGTGTTCAAATGTGCAGTACCTAGCACATCATTGTAGAAA 4325 ||||| || || | ||| | |||||| ||||| || ||| ||| | || Sbjct 1010 ACAAGAGGACCTTGAAGCTATGTTTGGGAATGTGTCATACCTCGCCCATTTCTGTCGCAA 1069 Query 4326 GAATGCACCGCTCTATGCCGCGGAGGCGCGTCGCGTCTTTGCCTTGGAGAAGCGCGTGCT 4385 | ||| | || ||| |||| || || |||| || | |||||| | || Sbjct 1070 GTTCCAACCATTATACGCCACGGAAGCTAAGCGAGTCTATGTTCTAGAGAAGAGAATGAA 1129 Query 4386 CGGAGCAATGCAGTTCAAGACCAAGAATCGAATTGAACCTGTTTGCTGCCTAATTCATGG 4445 | ||||||||||||| ||| | || ||||||||||| || | | ||| || Sbjct 1130 CAACTACATGCAGTTCAAGAGCAAACACCGTATTGAACCTGTATGTCTCATCATTAGAGG 1189 Query 4446 CACTCCTGGTACTGGCAAATCACTTGCAACTACAATCATCGGTCGTAAGATCGCCGAATA 4505 | | || || ||||| || || ||||| || ||||| | ||| || || || | Sbjct 1190 CTCACCAGGCACTGGAAAGTCCCTTGCGACCGGTATCATTGCTCGGGTCATAGCAGACAA 1249 Query 4506 TGAGAACAGTGGTGTCTACAGCCTCCCACCCGACCCAGATCATTTCGACGGGTATGCTGA 4565 | || | |||| ||| || ||||| ||||| || ||||| ||||||||| | Sbjct 1250 GTATCACTCTAGTGTGTACTCACTTCCACCAGACCCTGACCATTTTGACGGGTATAAACA 1309 Query 4566 GCAAGCCGTCGTAATCATGGATGATTTGCATCAAAACCCAGATGGGAAGGATATGAGTCT 4625 ||||| ||| | | ||||||||| || ||||||||| || || || || ||| | Sbjct 1310 GCAAGTGGTCACAGTTATGGATGATCTGTGTCAAAACCCTGACGGCAAAGACATGTCATT 1369 Query 4626 ATTTTGCCAGATGGTCTCCAC 4646 ||||||||||||||| ||||| Sbjct 1370 ATTTTGCCAGATGGTGTCCAC 1390 >seq1144 Length=1302 Score = 154 bits (170), Expect = 7e-34 Identities = 424/635 (67%), Gaps = 16/635 (3%) Strand=Plus/Plus Query 6043 AAGGAACCCGCAGTACTACATAAG-AAAGACCCCAGACTCGAGGTGAACTTCGAAGATGC 6101 |||||||| ||||| || | ||| |||||||| ||| | ||||| |||| ||| | || Sbjct 21 AAGGAACCAGCAGTTTTA-ACAAGTAAAGACCCTAGATTGGAGGTCGACTTTGAACAAGC 79 Query 6102 ACTTTTCTCCAAGTACATAGGAAATGTT---CACAAACCTG-TCACTGAGGAGA-TGGAG 6156 || || |||||||| | || |||||| ||| | || | | | | | | || | || Sbjct 80 CCTGTTTTCCAAGTATGTGGGCAATGTTTTACACGAGCCCGATGAAT-ATGTGACTCAAG 138 Query 6157 ATAGCAATTGATCATTATGCCAATCAGTTGAAGCAGCTTAATATTGACCCCACTCCCATT 6216 | || | || || || ||||| | || || | | || || | | || Sbjct 139 CT-GCCCTC---CACTACGCGAATCAACTTAAACAATTGGACATAAACACTAGCAAGATG 194 Query 6217 AGCATGGAGGATGCCATTTATGGTACTGAGGGCCTGGAGGCGCTAGACCTTGGCACCAGC 6276 ||||||||||| || ||||| ||||| ||||||||| | ||||| |||| || Sbjct 195 AGCATGGAGGAAGCGTGCTATGGCACTGAAAACCTGGAGGCAATTGACCTCTGCACTAGT 254 Query 6277 GCAGGTTACCCCTACGTGGCCCTAGGCATCAAGAAAAGAGACATT-TTAAATAAAGAGAC 6335 || || ||||| ||| ||||| ||||||||||||||||||||| || | | | || Sbjct 255 GCCGGGTACCCATACAGCGCCCTTGGCATCAAGAAAAGAGACATTCTTGACCCCACA-AC 313 Query 6336 TAGAGACGTGACCAAAATGAAGCAGTGTATCGACAAGTACGGTCTTAATCTGCCGATGGT 6395 || || ||| | || ||||| | ||| || || ||||| || ||||||| || | Sbjct 314 CAGGGATGTGTCTAAGATGAAATTCTATATGGATAAATACGGGCTAGATCTGCC-ATACT 372 Query 6396 C-ACCTATGTCAAAGATGAACTCAGATCCAAGGAGAAGGTGAAGAAGGGCAAGAGCAGAC 6454 | |||||||| || ||||| || || ||| ||| || | ||||| || ||| | Sbjct 373 CTACCTATGTGAAGGATGAGCTTAGGTCCCTGGATAAAATCAAGAAAGGAAAGTCACGCT 432 Query 6455 TCATTGAGGCGTCGAGTCTAAATGATTCTGTTGCAATGCGCTGCGCCTTTGGCAACCTCT 6514 | || ||||| || | ||||| ||||| | | || ||||| |||| | Sbjct 433 TGATAGAGGCTAGTAGCTTGAATGACTCTGTCTACCTCAGAATGGCTTTTGGGCACCTTT 492 Query 6515 ATAAGGCTTTCCACACCAACCCCGGCACCCTGACCGGATGCGCTGTGGGCTGCAATCCTG 6574 || |||| || || | ||||| ||||| |||| || | || ||||| || || || | Sbjct 493 ATGAGGCGTTTCATGCTAACCCTGGCACTGTGACTGGCTCAGCAGTGGGTTGTAACCCGG 552 Query 6575 AGACTTTTTGGAGCAAGATACCAGTAATGATGGATGGTGAGTTGTTTGGCTTTGACTACA 6634 | ||||||||||| |||| | || || ||| | | |||| |||||||||| Sbjct 553 ACGTGTTTTGGAGCAAACTACCGATTCTGCTGCCTGGGTCGCTCTTTGCCTTTGACTACT 612 Query 6635 CTGCGTACGATGCCAGCCTCTCACCAGTCTGGTTC 6669 | | || ||||| || ||| || || |||||| Sbjct 613 CAGGATATGATGCTAGTCTCAGCCCGGTATGGTTC 647 >seq945 Length=2018 Score = 113 bits (124), Expect = 2e-21 Identities = 127/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 1015 CCGCTCAAGTCCCCCTCCGCCGAGGCGTGTGGGTACAGTGATAGAGTAGCTCAGCTCACC 1074 || || ||||| || ||||| || || ||||| ||||||||| | || || || |||||| Sbjct 1623 CCACTGAAGTCTCCATCCGCTGAAGCTTGTGGTTACAGTGATCGCGTGGCACAACTCACC 1564 Query 1075 CTCGGCAACTCCACAATCACTACACAAGAAGCTGCCAACATTGTCGTGGGATATGGGCGC 1134 | || |||||||| || |||||||| || || || ||||| | || || || || Sbjct 1563 ATTGGGAACTCCACCATTACTACACAGGAGGCGGCAAACATCATAGTCGGTTACGGTGAG 1504 Query 1135 TGGCCCCAGTTCCGGAGTGATTGCGACGCCACAGCGGTGGATAAACCAAC 1184 |||||| | | | |||| |||||||||||||||||| |||||||| Sbjct 1503 TGGCCCTCATACTGCTCTGATGACGACGCCACAGCGGTGGACAAACCAAC 1454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 23505813721648