Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20murrelli_20[genbank_20GCA_5F001447425.1_202015-11-24] 5,242 sequences; 49,016,728 total letters Query= NC_033695.1 Length=7414 Score E Sequences producing significant alignments: (Bits) Value seq1144 228 4e-56 seq643 197 7e-47 seq906 187 1e-43 seq945 120 1e-23 >seq1144 Length=1302 Score = 228 bits (252), Expect = 4e-56 Identities = 440/640 (69%), Gaps = 12/640 (2%) Strand=Plus/Plus Query 6062 AGGTGAGAAAGAGCCAGCAGTTCTCCACAAG-AAAGATAAGAGGTTGGAAGTCGACTTCG 6120 |||| | || || ||||||||| | ||||| ||||| || ||||| |||||||| | Sbjct 14 AGGTAATAAGGAACCAGCAGTTTTA-ACAAGTAAAGACCCTAGATTGGAGGTCGACTTTG 72 Query 6121 AGGAGGCCCTCTTTTCCAAGTATATAGGCAACATC---CACAAGCCTG-TCACTGAGGAA 6176 | | ||||| |||||||||||| | ||||| | ||| |||| | | | | | | Sbjct 73 AACAAGCCCTGTTTTCCAAGTATGTGGGCAATGTTTTACACGAGCCCGATGAATATGTGA 132 Query 6177 ATGGAGATAGCGATAGATCATTATGCCAACCAACTTAAACAGCTGGATATCGACCCGACC 6236 | || | || | || || || || ||||||||||| |||| || || | | | Sbjct 133 CTCAAGCT-GCCCTC---CACTACGCGAATCAACTTAAACAATTGGACATAAACACTAGC 188 Query 6237 CCCATCAGCATGGAGGATGCCATCTATGGCACTGAAGGTTTGGAGGCGCTTGATCTCGGC 6296 || ||||||||||| || ||||||||||||| ||||||| |||| ||| || Sbjct 189 AAGATGAGCATGGAGGAAGCGTGCTATGGCACTGAAAACCTGGAGGCAATTGACCTCTGC 248 Query 6297 ACTAGTGCGGGTTATCCCTATGTGGCTCTTGGCATTAAGAAGAGAGACATCCTCAACAAG 6356 |||||||| || || || || || |||||||| ||||| |||||||| || || Sbjct 249 ACTAGTGCCGGGTACCCATACAGCGCCCTTGGCATCAAGAAAAGAGACATTCTTGACCCC 308 Query 6357 GAGACTAGGGATGTGACAAAGATGCAGCAATGCATTGACAAGTATGGGCTCAACCTTCCC 6416 || ||||||||| | |||||| | | || || || || ||||| | | | || Sbjct 309 ACAACCAGGGATGTGTCTAAGATGAAATTCTATATGGATAAATACGGGCTAGATC-TGCC 367 Query 6417 ATGGTC-ACCTATGTGAAGGACGAGCTTAGATCAAAAGAGAAAGTGAAGAAGGGCAAAAG 6475 || || |||||||||||||| |||||||| || || ||| | ||||| || || Sbjct 368 ATACTCTACCTATGTGAAGGATGAGCTTAGGTCCCTGGATAAAATCAAGAAAGGAAAGTC 427 Query 6476 CCGACTCATCGAGGCGTCGAGTCTGAATGATTCCGTTGCGATGAGGTGCGCCTTCGGAAA 6535 || | || ||||| || ||||||| || || | || || || || | Sbjct 428 ACGCTTGATAGAGGCTAGTAGCTTGAATGACTCTGTCTACCTCAGAATGGCTTTTGGGCA 487 Query 6536 TCTCTATAAGGCATTTCACACAAACCCTGGCACCCTGACTGGATGTGCTGTTGGGTGCAA 6595 || ||| |||| ||||| | ||||||||||| ||||||| | || || || || || Sbjct 488 CCTTTATGAGGCGTTTCATGCTAACCCTGGCACTGTGACTGGCTCAGCAGTGGGTTGTAA 547 Query 6596 CCCTGAAACTTTTTGGAGCAAAATTCCAGTCATGATGGATGGGGAGCTCTTTGGCTTTGA 6655 ||| || |||||||||||| | || | || || |||| |||||||| |||||| Sbjct 548 CCCGGACGTGTTTTGGAGCAAACTACCGATTCTGCTGCCTGGGTCGCTCTTTGCCTTTGA 607 Query 6656 CTACACAGCGTACGATGCCAGTCTCTCCCCCGTCTGGTTC 6695 |||| ||| || ||||| |||||| ||| || |||||| Sbjct 608 CTACTCAGGATATGATGCTAGTCTCAGCCCGGTATGGTTC 647 >seq643 Length=7254 Score = 197 bits (218), Expect = 7e-47 Identities = 530/800 (66%), Gaps = 8/800 (1%) Strand=Plus/Minus Query 3971 TGACATTGTCACTGTAACAGCTACACTTTCCCTGTTGGGGTGCTCCGGGTCACCATGGCG 4030 |||||| ||||| | || || |||||| ||||| | |||||| |||| || ||| Sbjct 3379 TGACATGGTCACATTGACGGCAACACTTGCCCTGATCGGGTGCCACGGGAGCCCTTGGGC 3320 Query 4031 TTGGCTCAAGGCGAAGATATGTTCCATCCTAGGGATCAATATGGCGCAAAAGCAGGCGGA 4090 ||| | ||| |||||| | || || | || || ||||| || |||||| | Sbjct 3319 CTGGGTTAAGTCGAAGACAGCATCAATTTTGGGCATACCGATGGCTCAGAAGCAGAGTGC 3260 Query 4091 CGGCTGGATAAAGAAGTTTACAGAAGCGGTGAATGCCTTTAAGGGTTTAGACTGGATTGC 4150 | ||| |||||||||| | || |||| || |||| ||||| | || ||||| | Sbjct 3259 CTCTTGGTTAAAGAAGTTCAACGATGCGGCGAGTGCCGCGAAGGGGCTTGAGTGGATCTC 3200 Query 4151 TGCCAAATTTTCCAAATTCCTCGATTGGATCAAATCAAAAATAATTCCAGAACTTAGGGA 4210 |||| | ||||| |||||||| |||| ||||| || || | || || Sbjct 3199 CAACAAAATCAGTAAATTTATCGATTGGCTCAAGGAGAAAATCATACCGGCTGCTAAAGA 3140 Query 4211 AAGAGCAGAGTTTGTCAAGAACCTTAAGCAACTCCCGCTTCTTGAAGCTC-AGATCAATA 4269 | || |||||| | || || || ||||||||||| ||| ||| || | | || || Sbjct 3139 GAAAGTCGAGTTTCTAAACAATCTAAAGCAACTCCC-CTTATTGGAGAACCAAATTTCTA 3081 Query 4270 CGCTCGAGCACTCTAATCCCAACCAGGAGACCCAGGAACAATTGTTTTCAAACGTTCAGT 4329 ||||| || || | |||||| || || ||||| ||||| | Sbjct 3080 ATCTCGAACAGTCAGCAGCTTCGCAGGAGGACCTTGAGGCGATGTTTGGCAACGTGTCTT 3021 Query 4330 ACCTGGCTCACCACTGTAGGAAAAACGCCCCGCTCTACGCAGCAGAGGCGCGGAGGGTTT 4389 ||||||| ||| ||| | ||| | || ||||| || | || || |||||| | Sbjct 3020 ACCTGGCCCACTTCTGCCGCAAATTCCAACCCCTCTATGCCACGGAAGCAAAGAGGGTGT 2961 Query 4390 ATGCCCTGGAAAAACGAGT-ATTAGGCGCAATGCAGTTCAAGACCAAGAATCGAATTGAA 4448 | ||||| ||||| || | | || || |||||||||||| ||| | || |||||| Sbjct 2960 ACGCCCTAGAAAAGAGAATGAATAATTACA-TGCAGTTCAAGAGCAAACACCGTATTGAA 2902 Query 4449 CCTGTTTGCTGCCTCATCCATGGCACACCCGGCACCGGTAAGTCCCTTGCCACCACTATC 4508 ||||| ||| | ||| ||| | || || || || ||||| | || || || Sbjct 2901 CCTGTATGCCTAATTATCAGAGGCTCGCCTGGTACTGGGAAGTCATTGGCAACAGGGATT 2842 Query 4509 ATCGGTAGGAAGATCGCTGAATATGAGAACAGTGGGGTCTACAGCTTACCACCTGATCCT 4568 || | ||| || || || | | || | || || |||||| || || || Sbjct 2841 ATTGCTAGAGCCATAGCAGACAAGTACCACTCCAGTGTGTATTCCTTACCTCCAGACCCA 2782 Query 4569 GACCACTTTGATGGATACCAAGAGCAGGCAGTGGTTATCATGGATGACCTCCACCAGAAC 4628 ||||||||||| |||||| || | ||| || | | ||||| ||||| ||| ||| Sbjct 2781 GACCACTTTGACGGATACAAACAACAGATCGTCACTGTTATGGACGACCTATGCCAAAAC 2722 Query 4629 CCAGACGGTAAGGACATGAGCCTATTTTGCCAGATGGTCTCCACGACTCCCTTTGTTGTC 4688 |||||||| || |||||| |||||||| |||||||||||||| | | ||| | | Sbjct 2721 CCAGACGGGAAAGACATGTCACTATTTTGTCAGATGGTCTCCAC-AGTGGATTTTATACC 2663 Query 4689 -CCAATGGCCGCTTTGGAGGATAAGGGCAGGCTC-TTCACCTCCAAATATGTATTGGCCT 4746 || ||||| || ||||||| ||||| || ||| ||||||||||| | ||| | |||| Sbjct 2662 GCCTATGGCATCTCTGGAGGAGAAGGG-AGTCTCATTCACCTCCAAGTTTGTGATTGCCT 2604 Query 4747 CGACCAACGCCAATCACATC 4766 | || ||||||| | ||||| Sbjct 2603 CCACTAACGCCAGTAACATC 2584 Score = 183 bits (202), Expect = 1e-42 Identities = 627/967 (65%), Gaps = 28/967 (3%) Strand=Plus/Minus Query 5743 TGTTTATGCCAGTCGGTGCAGTGAAGGATTATGGATACCTAAACCTTGCTGGTAGACCCA 5802 ||||| ||||||| || | ||| | ||||| | | |||||| ||||| |||| Sbjct 1619 TGTTTGTGCCAGTTGGAGATGTGGTCCAGTATGGGTTTTTGAACCTTAGTGGTAAGCCCA 1560 Query 5803 CACACCGTACGCTCATGTACAACTTCCCAACTAGAGCGGGGCAGTGCGGTGGAGTTGCCG 5862 | ||| | || | |||||||| |||||||| | ||| || ||||| ||||| |||| Sbjct 1559 CTCACAGGACTATGATGTACAATTTCCCAACAAAAGCAGGACAGTGTGGTGGTGTTGTGA 1500 Query 5863 TTTCTATGGGCAAGGTGATCGGCATCCACATTGGAGGTAATGGGGCTCAAGGATTCGCGG 5922 | | |||| || ||||| || ||||||||||| || || || ||||| ||| | Sbjct 1499 CTGCCGTGGGTAAAGTGATTGGGATCCACATTGGTGGCAACGGTAGGCAAGGTTTCTGCG 1440 Query 5923 CAGCTTTACTCCGTAGATACTT---CACTCAACCCCAGGGGGAGATTGAATTTATGGAGA 5979 | || | | ||||||| || | ||| | || ||||| ||| ||| || Sbjct 1439 CTGCCCTGAAGAGGGGATACTTTTGCAGTGAAC---AAGGTGAGATCCAATGGATGAAGC 1383 Query 5980 AGAGTAAAGATGCAGGCTACCCCATAATCAACGCCCCCACCAAGACCAAGCTCCACCCAA 6039 | ||||| | ||| | ||||||| || || || ||||| | |||| Sbjct 1382 CCAACAAAGAAACTGGCAGGTTGAACATCAACGGACCTACTCGCACAAAGCTTGAACCAA 1323 Query 6040 GTGTGTTCTTTGATATCTTCCCAGGTGAGAAAGAGCCAGCAGTTCTCCACAAG-AAAGAT 6098 |||| || ||| | ||| ||| |||||||||||||| || || || ||||| Sbjct 1322 GTGTCTTTCACGATGTGTTCGAAGGCACTAAAGAGCCAGCAGTGCTG-ACTAGTAAAGAC 1264 Query 6099 AAGAGGTTGGAAGTCGACTTCGAGGAGGCCCTCTTTTCCAAGTATATAGGCAACA---TC 6155 ||| ||||||| ||||| || |||| || ||||| || || | || |||| | Sbjct 1263 CCAAGGCTGGAAGTTGACTTTGAACAGGCTCTTTTTTCAAAATACGTGGGGAACACGCTT 1204 Query 6156 CACAAGCCTGTC-ACTGAGGAAATGGAGATAGCGATAGATCATTATGCCAACCAACTTAA 6214 || | || | | | | | || |||| || || ||||||||||||||||| || Sbjct 1203 CATGAACCCGACGAGTTTGTCAA-GGAGGCGGCCTTA---CATTATGCCAACCAACTCAA 1148 Query 6215 ACAGCTGGATATCGACCCGACCCCCATCAGCATGGAGGATGCCATCTATGGCACTGAAGG 6274 ||| | |||||| | | ||| || |||||||||||||| || ||||| || Sbjct 1147 GCAGTTAGATATCAAGACCACCAAGATGAGCATGGAGGATGCATGTTACGGCACAGAGAA 1088 Query 6275 TTTGGAGGCGCTTGATCTCGGCACTAGTGCGGGTTATCCCTATGTGGCTCTTGGCATTAA 6334 |||| || | ||||| ||| ||||| || ||||| || || || ||||| || Sbjct 1087 CCTGGAAGCTATAGATCTTCACACAAGTGCAGGATATCCATACAGTGCACTAGGCATCAA 1028 Query 6335 GAAGAGAGACATCCT-----CAACAAGGAGACTAGGGATGTGACAAAGATGCAGCAATGC 6389 ||| | ||||| | ||||| ||| | ||||| | |||||| | | | Sbjct 1027 GAAAAAGGACATTTTGGATCCAACA-----ACTCGCGATGTCAGCAAGATGAAATTCTAC 973 Query 6390 ATTGACAAGTATGGGCTCAACCTTCCCATGGTC-ACCTATGTGAAGGACGAGCTTAGATC 6448 || |||||||||||| | | | | || | || || ||||| || || || ||||| | Sbjct 972 ATGGACAAGTATGGGTTGGATC-TACCGTACTCTACTTATGTTAAAGATGAACTTAGGGC 914 Query 6449 AAAAGAGAAAGTGAAGAAGGGCAAAAGCCGACTCATCGAGGCGTCGAGTCTGAATGATTC 6508 | || || | ||||| || || || ||||| || ||| || || ||||| || Sbjct 913 CATCGACAAGATCAAGAAAGGGAAGTCTCGTCTCATAGAAGCGAGCAGCCTAAATGACTC 854 Query 6509 CGTTGCGATGAGGTGCGCCTTCGGAAATCTCTATAAGGCATTTCACACAAACCCTGGCAC 6568 || |||| | || || | || ||| | || || ||| | || || || || Sbjct 853 AGTGTACTTGAGAATGACATTTGGGCACCTTTATGAAGCTTTCCACGCCAATCCAGGTAC 794 Query 6569 CCTGACTGGATGTGCTGTTGGGTGCAACCCTGAAACTTTTTGGAGCAAAATTCCAGTCAT 6628 | || || | ||||||||||||||||| || || |||||||| | ||| | | Sbjct 793 AATCACCGGTTCAGCTGTTGGGTGCAACCCAGATGTGTTCTGGAGCAAGTTACCAATTCT 734 Query 6629 GATGGATGGGGAGCTCTTTGGCTTTGACTACACAGCGTACGATGCCAGTCTCTCCCCCGT 6688 | || ||| || | ||||||||| | | ||| || || |||||| ||| || Sbjct 733 ACTCCCAGGATCGCTTTTCGCGTTTGACTACTCGGGGTATGACGCTAGTCTCAGCCCAGT 674 Query 6689 CTGGTTC 6695 |||||| Sbjct 673 GTGGTTC 667 >seq906 Length=2416 Score = 187 bits (206), Expect = 1e-43 Identities = 810/1270 (64%), Gaps = 16/1270 (1%) Strand=Plus/Plus Query 3495 ATTGCCCGCTGCGATTGTCGCGCTGGGGTGTATTACTGCAAGTCCAGAATGAAACACTAT 3554 ||||| || || || |||| | || |||||||| ||||| |||| | || |||||| Sbjct 213 ATTGCACGTTGTGACTGTCAAACAGGAGTGTATTATTGCAATTCCAAGAGAAAGCACTAT 272 Query 3555 CCGGTTGTAGTCACTCCTCCCAGTCTAGTCCACGTTGATAAAAATGATTACTACCCTGAA 3614 || || | || ||||| || | | || || | || || ||||||| Sbjct 273 CCAGTCAGCTTTTCTAAACCCAGCCTCATATATGTGGAAGCTAGCGAGTATTACCCTGCT 332 Query 3615 AGATACCAATCACACGTGGCCCTGGGCATCGGGTT-CGCGGAACCTGGTGATTGTGGTGG 3673 ||||||||||| ||| || || | || |||| | | || || || || || || || Sbjct 333 AGATACCAATCGCACCTGATGCTTG-CAGCGGGCCACTCTGAGCCCGGCGACTGCGGAGG 391 Query 3674 GCTCTTGCGCTGTGAACATGGCGTGATGGGCATCCTCACGGCAGGTGGCAACAACCTTGT 3733 |||| | ||| ||||||| || | || || | | | ||||||||| || || Sbjct 392 CATCTTAAGGTGTCAACATGGTGTAGTTGGTATAGTGTCCACGGGTGGCAACGGGCTCGT 451 Query 3734 TGCTTTTGCTGATATTAGGGATCTTCTGTGGATCGAAGATGATGTTATGGAGCAGGGCCT 3793 || ||||||||| | |||||||| ||||| | || || || | ||||||||| || | Sbjct 452 TGGATTTGCTGATGTGAGGGATCTCTTGTGGTTAGATGAAGAGGCTATGGAGCAAGGTGT 511 Query 3794 TACAGACTATGTCCAGAGCCTCGGGAATGCTTTCGGAGCTGGTTTTACAGATGAGATCTC 3853 | ||||| | || | ||||| | || || ||| | || || || || | | || Sbjct 512 GTCCGACTACATTAAGGGGCTCGGTGACGCGTTTGGAACAGGCTTCACTGAAGCTGTATC 571 Query 3854 CAACTATGTCGGGCAGGTTCGTGACATGATGGTTGGATCAGACACAGTGGTGGAAAAGAT 3913 || | || | || | || | | ||||| || || ||| || || || Sbjct 572 CAGGGAAGTTGAAGCCCTTAGGAACCACCTCATAGGATCTGATGGAGCGGTTGAGAAAAT 631 Query 3914 TGTGAGAAATATTATCAAGCTCTTGTCTGCTTTGGTTATAGTGGTTAGAAACCGCAGTGA 3973 | | || |||| ||||| | || || || || || ||| | || | | ||| Sbjct 632 CCTAAAGAACCTTATTAAGCTGATTTCAGCGTTAGTAATTGTGATCAGGAGCGATTATGA 691 Query 3974 CATTGTCACTGTAACAGCTACACTTTCCCTGTTGGGGTGCTCCGGGTCACCATGGCGTTG 4033 || ||||| | ||||| || | ||||| | || || ||| || ||| ||| Sbjct 692 TATGGTCACCCTCACAGCAACTTTAGCCCTGATTGGTTGTCACGGAAGTCCTTGGGCTTG 751 Query 4034 GCTCAAGGCGAAGATATGTTCCATCCTAGGGATCAATATGGCGCAAAAGCAGGCGGACGG 4093 | | || || |||| | |||||| |||| ||| || || || |||||| | Sbjct 752 GATTAAAGCCAAGACAGCATCCATCTTAGGTATCCCCATCGCCCAGAAGCAGAGTGCTTC 811 Query 4094 CTGGATAAAGAAGTTTACAGAAGCGGTGAATGCCTTTAAGGGTTTAGACTGGATTGCTGC 4153 ||| ||||||| |||| || || || |||| ||||||||||| ||||| | Sbjct 812 TTGGCTAAAGAAATTTAATGATATGGCGAGTGCCGCCAAGGGTTTAGAATGGATATCCAA 871 Query 4154 CAAATTTTCCAAATTCCTCGATTGGATCAAATCAAAAATAATTCCAGAACTTAGGGAAAG 4213 |||| || || ||| | || ||| ||| || || |||||| | | ||| | Sbjct 872 CAAAATTAGTAAGTTCATTGACTGGCTCAGGGAGAAGATTGTTCCAGCAGCCAAGGAGAA 931 Query 4214 AGCAGAGTTTGTCAAGAACCTTAAGCAACTCCCGCTTCTTGAAGCTCAGATCAATACGCT 4273 |||||| ||| | | || | |||||| | || || | || ||||||| | | Sbjct 932 AGCAGAATTTTTAACCAATTTGAAGCAATTGCCACTGTTAGAGAACCAGATCACGAACTT 991 Query 4274 CGAGCACTCTAATCCCAACCAGGAGACCCAGGAACAATTGTTTTCAAACGT-TCAGTACC 4332 ||||| || | || || ||| || ||| ||||| || || ||| |||| Sbjct 992 AGAGCAGTCCGCTGCCTCACAAGAGGACCTTGAAGCTATGTTTGGGAATGTGTCA-TACC 1050 Query 4333 TGGCTCACCACTGTAGGAAAAACGCCCCGCTCTACGCAGCAGAGGCGCGGAGGGTTTATG 4392 | || || |||| | || | || | ||||| | || || | | || |||| Sbjct 1051 TCGCCCATTTCTGTCGCAAGTTCCAACCATTATACGCCACGGAAGCTAAGCGAGTCTATG 1110 Query 4393 CCCTGGAAAAACGAGTATTAGGCGCAA--TGCAGTTCAAGACCAAGAATCGAATTGAACC 4450 || || || ||| || | | | |||||||||||| ||| | || |||||||| Sbjct 1111 TTCTAGAGAA--GAGAATGAACAACTACATGCAGTTCAAGAGCAAACACCGTATTGAACC 1168 Query 4451 TGTTTGCTGCCTCATCCATGGCACACCCGGCACCGGTAAGTCCCTTGCCACCACTATCAT 4510 ||| || | |||| ||| |||| ||||| || ||||||||||| ||| |||||| Sbjct 1169 TGTATGTCTCATCATTAGAGGCTCACCAGGCACTGGAAAGTCCCTTGCGACCGGTATCAT 1228 Query 4511 CGGTAGGAAGATCGCTGAATATGAGAACAGTGGGGTCTACAGCTTACCACCTGATCCTGA 4570 | | || || || || | | || | | || ||| | ||||| || ||||| Sbjct 1229 TGCTCGGGTCATAGCAGACAAGTATCACTCTAGTGTGTACTCACTTCCACCAGACCCTGA 1288 Query 4571 CCACTTTGATGGATACCAAGAGCAGGCAGTGGTTA---TCATGGATGACCTCCACCAGAA 4627 ||| ||||| || || || |||| |||||| | | |||||||| || || || Sbjct 1289 CCATTTTGACGGGTATAAACAGCA---AGTGGTCACAGTTATGGATGATCTGTGTCAAAA 1345 Query 4628 CCCAGACGGTAAGGACATGAGCCTATTTTGCCAGATGGTCTCCACGACTCCCTTTGTTGT 4687 ||| ||||| || |||||| |||||||||||||||| ||||| ||| | Sbjct 1346 CCCTGACGGCAAAGACATGTCATTATTTTGCCAGATGGTGTCCACCGTGGATTTTATCCC 1405 Query 4688 CCCAATGGCCGCTTTGGAGGATAAGGGCAGGCT-CTTCACCTCCAAATATGTATTGGCCT 4746 |||||||| || | || || ||||| || | |||||| || |||| ||| | || | Sbjct 1406 ACCAATGGCTTCTCTCGAAGAAAAGGG-AGTTTCCTTCACATCTAAATTTGTTATCGCAT 1464 Query 4747 CGACCAACGC 4756 | |||||||| Sbjct 1465 CCACCAACGC 1474 >seq945 Length=2018 Score = 120 bits (132), Expect = 1e-23 Identities = 218/312 (70%), Gaps = 8/312 (3%) Strand=Plus/Minus Query 1020 CCCCTTAAGTCACCATCAGCAGAGGCGTGCGGGTATAGCGACAGGGTCGCTCAACTTACC 1079 || || ||||| ||||| || || || || || || || || | || || ||||| ||| Sbjct 1623 CCACTGAAGTCTCCATCCGCTGAAGCTTGTGGTTACAGTGATCGCGTGGCACAACTCACC 1564 Query 1080 CTGGGCAATTCGACCATCACAACGCAGGAGGCGGCAAACATCTGCGTCGGGTATGGGGAA 1139 | || || || ||||| || || |||||||||||||||||| ||||| || || || Sbjct 1563 ATTGGGAACTCCACCATTACTACACAGGAGGCGGCAAACATCATAGTCGGTTACGGTGAG 1504 Query 1140 TGGCCATCACACCTGGAC-GACCACGACGCCACGGCAGTTGACAGACCAACCCACCCTGG 1198 ||||| ||| | ||| | || |||||||||| || || |||| |||||| | ||| | Sbjct 1503 TGGCCCTCATA-CTGCTCTGATGACGACGCCACAGCGGTGGACAAACCAACGCGCCCAGA 1445 Query 1199 TGTCTCTTGTG-AGAGATTTTATACCCTCCCGTCAGTTGA--GTGGACTAATACTTGGAA 1255 ||| || ||| | || |||||||| || | || | | |||| || | | || Sbjct 1444 TGTTTC-GGTGAATAGGTTTTATACACT--GGACACTAAACTGTGGGAAAAGTCATCTAA 1388 Query 1256 AGGTCAATACTGGAAGCTACCAAACGCTCTCACCGAGACTGGGATGTTCGGCCAAAATGC 1315 ||| || |||||| | || | | | || ||||| || | || ||||| || || Sbjct 1387 GGGTTGGTATTGGAAGTTTCCTGATGTGTTGACTGAGACCGGAGTCTTTGGCCAGAACGC 1328 Query 1316 ACAGTTTCACTA 1327 |||||||||||| Sbjct 1327 ACAGTTTCACTA 1316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 23608207682864