Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20murrelli_20[genbank_20GCA_5F001447425.1_202015-11-24]
5,242 sequences; 49,016,728 total letters
Query= NC_033695.1
Length=7414
Score E
Sequences producing significant alignments: (Bits) Value
seq1144 228 4e-56
seq643 197 7e-47
seq906 187 1e-43
seq945 120 1e-23
>seq1144
Length=1302
Score = 228 bits (252), Expect = 4e-56
Identities = 440/640 (69%), Gaps = 12/640 (2%)
Strand=Plus/Plus
Query 6062 AGGTGAGAAAGAGCCAGCAGTTCTCCACAAG-AAAGATAAGAGGTTGGAAGTCGACTTCG 6120
|||| | || || ||||||||| | ||||| ||||| || ||||| |||||||| |
Sbjct 14 AGGTAATAAGGAACCAGCAGTTTTA-ACAAGTAAAGACCCTAGATTGGAGGTCGACTTTG 72
Query 6121 AGGAGGCCCTCTTTTCCAAGTATATAGGCAACATC---CACAAGCCTG-TCACTGAGGAA 6176
| | ||||| |||||||||||| | ||||| | ||| |||| | | | | | |
Sbjct 73 AACAAGCCCTGTTTTCCAAGTATGTGGGCAATGTTTTACACGAGCCCGATGAATATGTGA 132
Query 6177 ATGGAGATAGCGATAGATCATTATGCCAACCAACTTAAACAGCTGGATATCGACCCGACC 6236
| || | || | || || || || ||||||||||| |||| || || | | |
Sbjct 133 CTCAAGCT-GCCCTC---CACTACGCGAATCAACTTAAACAATTGGACATAAACACTAGC 188
Query 6237 CCCATCAGCATGGAGGATGCCATCTATGGCACTGAAGGTTTGGAGGCGCTTGATCTCGGC 6296
|| ||||||||||| || ||||||||||||| ||||||| |||| ||| ||
Sbjct 189 AAGATGAGCATGGAGGAAGCGTGCTATGGCACTGAAAACCTGGAGGCAATTGACCTCTGC 248
Query 6297 ACTAGTGCGGGTTATCCCTATGTGGCTCTTGGCATTAAGAAGAGAGACATCCTCAACAAG 6356
|||||||| || || || || || |||||||| ||||| |||||||| || ||
Sbjct 249 ACTAGTGCCGGGTACCCATACAGCGCCCTTGGCATCAAGAAAAGAGACATTCTTGACCCC 308
Query 6357 GAGACTAGGGATGTGACAAAGATGCAGCAATGCATTGACAAGTATGGGCTCAACCTTCCC 6416
|| ||||||||| | |||||| | | || || || || ||||| | | | ||
Sbjct 309 ACAACCAGGGATGTGTCTAAGATGAAATTCTATATGGATAAATACGGGCTAGATC-TGCC 367
Query 6417 ATGGTC-ACCTATGTGAAGGACGAGCTTAGATCAAAAGAGAAAGTGAAGAAGGGCAAAAG 6475
|| || |||||||||||||| |||||||| || || ||| | ||||| || ||
Sbjct 368 ATACTCTACCTATGTGAAGGATGAGCTTAGGTCCCTGGATAAAATCAAGAAAGGAAAGTC 427
Query 6476 CCGACTCATCGAGGCGTCGAGTCTGAATGATTCCGTTGCGATGAGGTGCGCCTTCGGAAA 6535
|| | || ||||| || ||||||| || || | || || || || |
Sbjct 428 ACGCTTGATAGAGGCTAGTAGCTTGAATGACTCTGTCTACCTCAGAATGGCTTTTGGGCA 487
Query 6536 TCTCTATAAGGCATTTCACACAAACCCTGGCACCCTGACTGGATGTGCTGTTGGGTGCAA 6595
|| ||| |||| ||||| | ||||||||||| ||||||| | || || || || ||
Sbjct 488 CCTTTATGAGGCGTTTCATGCTAACCCTGGCACTGTGACTGGCTCAGCAGTGGGTTGTAA 547
Query 6596 CCCTGAAACTTTTTGGAGCAAAATTCCAGTCATGATGGATGGGGAGCTCTTTGGCTTTGA 6655
||| || |||||||||||| | || | || || |||| |||||||| ||||||
Sbjct 548 CCCGGACGTGTTTTGGAGCAAACTACCGATTCTGCTGCCTGGGTCGCTCTTTGCCTTTGA 607
Query 6656 CTACACAGCGTACGATGCCAGTCTCTCCCCCGTCTGGTTC 6695
|||| ||| || ||||| |||||| ||| || ||||||
Sbjct 608 CTACTCAGGATATGATGCTAGTCTCAGCCCGGTATGGTTC 647
>seq643
Length=7254
Score = 197 bits (218), Expect = 7e-47
Identities = 530/800 (66%), Gaps = 8/800 (1%)
Strand=Plus/Minus
Query 3971 TGACATTGTCACTGTAACAGCTACACTTTCCCTGTTGGGGTGCTCCGGGTCACCATGGCG 4030
|||||| ||||| | || || |||||| ||||| | |||||| |||| || |||
Sbjct 3379 TGACATGGTCACATTGACGGCAACACTTGCCCTGATCGGGTGCCACGGGAGCCCTTGGGC 3320
Query 4031 TTGGCTCAAGGCGAAGATATGTTCCATCCTAGGGATCAATATGGCGCAAAAGCAGGCGGA 4090
||| | ||| |||||| | || || | || || ||||| || |||||| |
Sbjct 3319 CTGGGTTAAGTCGAAGACAGCATCAATTTTGGGCATACCGATGGCTCAGAAGCAGAGTGC 3260
Query 4091 CGGCTGGATAAAGAAGTTTACAGAAGCGGTGAATGCCTTTAAGGGTTTAGACTGGATTGC 4150
| ||| |||||||||| | || |||| || |||| ||||| | || ||||| |
Sbjct 3259 CTCTTGGTTAAAGAAGTTCAACGATGCGGCGAGTGCCGCGAAGGGGCTTGAGTGGATCTC 3200
Query 4151 TGCCAAATTTTCCAAATTCCTCGATTGGATCAAATCAAAAATAATTCCAGAACTTAGGGA 4210
|||| | ||||| |||||||| |||| ||||| || || | || ||
Sbjct 3199 CAACAAAATCAGTAAATTTATCGATTGGCTCAAGGAGAAAATCATACCGGCTGCTAAAGA 3140
Query 4211 AAGAGCAGAGTTTGTCAAGAACCTTAAGCAACTCCCGCTTCTTGAAGCTC-AGATCAATA 4269
| || |||||| | || || || ||||||||||| ||| ||| || | | || ||
Sbjct 3139 GAAAGTCGAGTTTCTAAACAATCTAAAGCAACTCCC-CTTATTGGAGAACCAAATTTCTA 3081
Query 4270 CGCTCGAGCACTCTAATCCCAACCAGGAGACCCAGGAACAATTGTTTTCAAACGTTCAGT 4329
||||| || || | |||||| || || ||||| ||||| |
Sbjct 3080 ATCTCGAACAGTCAGCAGCTTCGCAGGAGGACCTTGAGGCGATGTTTGGCAACGTGTCTT 3021
Query 4330 ACCTGGCTCACCACTGTAGGAAAAACGCCCCGCTCTACGCAGCAGAGGCGCGGAGGGTTT 4389
||||||| ||| ||| | ||| | || ||||| || | || || |||||| |
Sbjct 3020 ACCTGGCCCACTTCTGCCGCAAATTCCAACCCCTCTATGCCACGGAAGCAAAGAGGGTGT 2961
Query 4390 ATGCCCTGGAAAAACGAGT-ATTAGGCGCAATGCAGTTCAAGACCAAGAATCGAATTGAA 4448
| ||||| ||||| || | | || || |||||||||||| ||| | || ||||||
Sbjct 2960 ACGCCCTAGAAAAGAGAATGAATAATTACA-TGCAGTTCAAGAGCAAACACCGTATTGAA 2902
Query 4449 CCTGTTTGCTGCCTCATCCATGGCACACCCGGCACCGGTAAGTCCCTTGCCACCACTATC 4508
||||| ||| | ||| ||| | || || || || ||||| | || || ||
Sbjct 2901 CCTGTATGCCTAATTATCAGAGGCTCGCCTGGTACTGGGAAGTCATTGGCAACAGGGATT 2842
Query 4509 ATCGGTAGGAAGATCGCTGAATATGAGAACAGTGGGGTCTACAGCTTACCACCTGATCCT 4568
|| | ||| || || || | | || | || || |||||| || || ||
Sbjct 2841 ATTGCTAGAGCCATAGCAGACAAGTACCACTCCAGTGTGTATTCCTTACCTCCAGACCCA 2782
Query 4569 GACCACTTTGATGGATACCAAGAGCAGGCAGTGGTTATCATGGATGACCTCCACCAGAAC 4628
||||||||||| |||||| || | ||| || | | ||||| ||||| ||| |||
Sbjct 2781 GACCACTTTGACGGATACAAACAACAGATCGTCACTGTTATGGACGACCTATGCCAAAAC 2722
Query 4629 CCAGACGGTAAGGACATGAGCCTATTTTGCCAGATGGTCTCCACGACTCCCTTTGTTGTC 4688
|||||||| || |||||| |||||||| |||||||||||||| | | ||| | |
Sbjct 2721 CCAGACGGGAAAGACATGTCACTATTTTGTCAGATGGTCTCCAC-AGTGGATTTTATACC 2663
Query 4689 -CCAATGGCCGCTTTGGAGGATAAGGGCAGGCTC-TTCACCTCCAAATATGTATTGGCCT 4746
|| ||||| || ||||||| ||||| || ||| ||||||||||| | ||| | ||||
Sbjct 2662 GCCTATGGCATCTCTGGAGGAGAAGGG-AGTCTCATTCACCTCCAAGTTTGTGATTGCCT 2604
Query 4747 CGACCAACGCCAATCACATC 4766
| || ||||||| | |||||
Sbjct 2603 CCACTAACGCCAGTAACATC 2584
Score = 183 bits (202), Expect = 1e-42
Identities = 627/967 (65%), Gaps = 28/967 (3%)
Strand=Plus/Minus
Query 5743 TGTTTATGCCAGTCGGTGCAGTGAAGGATTATGGATACCTAAACCTTGCTGGTAGACCCA 5802
||||| ||||||| || | ||| | ||||| | | |||||| ||||| ||||
Sbjct 1619 TGTTTGTGCCAGTTGGAGATGTGGTCCAGTATGGGTTTTTGAACCTTAGTGGTAAGCCCA 1560
Query 5803 CACACCGTACGCTCATGTACAACTTCCCAACTAGAGCGGGGCAGTGCGGTGGAGTTGCCG 5862
| ||| | || | |||||||| |||||||| | ||| || ||||| ||||| ||||
Sbjct 1559 CTCACAGGACTATGATGTACAATTTCCCAACAAAAGCAGGACAGTGTGGTGGTGTTGTGA 1500
Query 5863 TTTCTATGGGCAAGGTGATCGGCATCCACATTGGAGGTAATGGGGCTCAAGGATTCGCGG 5922
| | |||| || ||||| || ||||||||||| || || || ||||| ||| |
Sbjct 1499 CTGCCGTGGGTAAAGTGATTGGGATCCACATTGGTGGCAACGGTAGGCAAGGTTTCTGCG 1440
Query 5923 CAGCTTTACTCCGTAGATACTT---CACTCAACCCCAGGGGGAGATTGAATTTATGGAGA 5979
| || | | ||||||| || | ||| | || ||||| ||| ||| ||
Sbjct 1439 CTGCCCTGAAGAGGGGATACTTTTGCAGTGAAC---AAGGTGAGATCCAATGGATGAAGC 1383
Query 5980 AGAGTAAAGATGCAGGCTACCCCATAATCAACGCCCCCACCAAGACCAAGCTCCACCCAA 6039
| ||||| | ||| | ||||||| || || || ||||| | ||||
Sbjct 1382 CCAACAAAGAAACTGGCAGGTTGAACATCAACGGACCTACTCGCACAAAGCTTGAACCAA 1323
Query 6040 GTGTGTTCTTTGATATCTTCCCAGGTGAGAAAGAGCCAGCAGTTCTCCACAAG-AAAGAT 6098
|||| || ||| | ||| ||| |||||||||||||| || || || |||||
Sbjct 1322 GTGTCTTTCACGATGTGTTCGAAGGCACTAAAGAGCCAGCAGTGCTG-ACTAGTAAAGAC 1264
Query 6099 AAGAGGTTGGAAGTCGACTTCGAGGAGGCCCTCTTTTCCAAGTATATAGGCAACA---TC 6155
||| ||||||| ||||| || |||| || ||||| || || | || |||| |
Sbjct 1263 CCAAGGCTGGAAGTTGACTTTGAACAGGCTCTTTTTTCAAAATACGTGGGGAACACGCTT 1204
Query 6156 CACAAGCCTGTC-ACTGAGGAAATGGAGATAGCGATAGATCATTATGCCAACCAACTTAA 6214
|| | || | | | | | || |||| || || ||||||||||||||||| ||
Sbjct 1203 CATGAACCCGACGAGTTTGTCAA-GGAGGCGGCCTTA---CATTATGCCAACCAACTCAA 1148
Query 6215 ACAGCTGGATATCGACCCGACCCCCATCAGCATGGAGGATGCCATCTATGGCACTGAAGG 6274
||| | |||||| | | ||| || |||||||||||||| || ||||| ||
Sbjct 1147 GCAGTTAGATATCAAGACCACCAAGATGAGCATGGAGGATGCATGTTACGGCACAGAGAA 1088
Query 6275 TTTGGAGGCGCTTGATCTCGGCACTAGTGCGGGTTATCCCTATGTGGCTCTTGGCATTAA 6334
|||| || | ||||| ||| ||||| || ||||| || || || ||||| ||
Sbjct 1087 CCTGGAAGCTATAGATCTTCACACAAGTGCAGGATATCCATACAGTGCACTAGGCATCAA 1028
Query 6335 GAAGAGAGACATCCT-----CAACAAGGAGACTAGGGATGTGACAAAGATGCAGCAATGC 6389
||| | ||||| | ||||| ||| | ||||| | |||||| | | |
Sbjct 1027 GAAAAAGGACATTTTGGATCCAACA-----ACTCGCGATGTCAGCAAGATGAAATTCTAC 973
Query 6390 ATTGACAAGTATGGGCTCAACCTTCCCATGGTC-ACCTATGTGAAGGACGAGCTTAGATC 6448
|| |||||||||||| | | | | || | || || ||||| || || || ||||| |
Sbjct 972 ATGGACAAGTATGGGTTGGATC-TACCGTACTCTACTTATGTTAAAGATGAACTTAGGGC 914
Query 6449 AAAAGAGAAAGTGAAGAAGGGCAAAAGCCGACTCATCGAGGCGTCGAGTCTGAATGATTC 6508
| || || | ||||| || || || ||||| || ||| || || ||||| ||
Sbjct 913 CATCGACAAGATCAAGAAAGGGAAGTCTCGTCTCATAGAAGCGAGCAGCCTAAATGACTC 854
Query 6509 CGTTGCGATGAGGTGCGCCTTCGGAAATCTCTATAAGGCATTTCACACAAACCCTGGCAC 6568
|| |||| | || || | || ||| | || || ||| | || || || ||
Sbjct 853 AGTGTACTTGAGAATGACATTTGGGCACCTTTATGAAGCTTTCCACGCCAATCCAGGTAC 794
Query 6569 CCTGACTGGATGTGCTGTTGGGTGCAACCCTGAAACTTTTTGGAGCAAAATTCCAGTCAT 6628
| || || | ||||||||||||||||| || || |||||||| | ||| | |
Sbjct 793 AATCACCGGTTCAGCTGTTGGGTGCAACCCAGATGTGTTCTGGAGCAAGTTACCAATTCT 734
Query 6629 GATGGATGGGGAGCTCTTTGGCTTTGACTACACAGCGTACGATGCCAGTCTCTCCCCCGT 6688
| || ||| || | ||||||||| | | ||| || || |||||| ||| ||
Sbjct 733 ACTCCCAGGATCGCTTTTCGCGTTTGACTACTCGGGGTATGACGCTAGTCTCAGCCCAGT 674
Query 6689 CTGGTTC 6695
||||||
Sbjct 673 GTGGTTC 667
>seq906
Length=2416
Score = 187 bits (206), Expect = 1e-43
Identities = 810/1270 (64%), Gaps = 16/1270 (1%)
Strand=Plus/Plus
Query 3495 ATTGCCCGCTGCGATTGTCGCGCTGGGGTGTATTACTGCAAGTCCAGAATGAAACACTAT 3554
||||| || || || |||| | || |||||||| ||||| |||| | || ||||||
Sbjct 213 ATTGCACGTTGTGACTGTCAAACAGGAGTGTATTATTGCAATTCCAAGAGAAAGCACTAT 272
Query 3555 CCGGTTGTAGTCACTCCTCCCAGTCTAGTCCACGTTGATAAAAATGATTACTACCCTGAA 3614
|| || | || ||||| || | | || || | || || |||||||
Sbjct 273 CCAGTCAGCTTTTCTAAACCCAGCCTCATATATGTGGAAGCTAGCGAGTATTACCCTGCT 332
Query 3615 AGATACCAATCACACGTGGCCCTGGGCATCGGGTT-CGCGGAACCTGGTGATTGTGGTGG 3673
||||||||||| ||| || || | || |||| | | || || || || || || ||
Sbjct 333 AGATACCAATCGCACCTGATGCTTG-CAGCGGGCCACTCTGAGCCCGGCGACTGCGGAGG 391
Query 3674 GCTCTTGCGCTGTGAACATGGCGTGATGGGCATCCTCACGGCAGGTGGCAACAACCTTGT 3733
|||| | ||| ||||||| || | || || | | | ||||||||| || ||
Sbjct 392 CATCTTAAGGTGTCAACATGGTGTAGTTGGTATAGTGTCCACGGGTGGCAACGGGCTCGT 451
Query 3734 TGCTTTTGCTGATATTAGGGATCTTCTGTGGATCGAAGATGATGTTATGGAGCAGGGCCT 3793
|| ||||||||| | |||||||| ||||| | || || || | ||||||||| || |
Sbjct 452 TGGATTTGCTGATGTGAGGGATCTCTTGTGGTTAGATGAAGAGGCTATGGAGCAAGGTGT 511
Query 3794 TACAGACTATGTCCAGAGCCTCGGGAATGCTTTCGGAGCTGGTTTTACAGATGAGATCTC 3853
| ||||| | || | ||||| | || || ||| | || || || || | | ||
Sbjct 512 GTCCGACTACATTAAGGGGCTCGGTGACGCGTTTGGAACAGGCTTCACTGAAGCTGTATC 571
Query 3854 CAACTATGTCGGGCAGGTTCGTGACATGATGGTTGGATCAGACACAGTGGTGGAAAAGAT 3913
|| | || | || | || | | ||||| || || ||| || || ||
Sbjct 572 CAGGGAAGTTGAAGCCCTTAGGAACCACCTCATAGGATCTGATGGAGCGGTTGAGAAAAT 631
Query 3914 TGTGAGAAATATTATCAAGCTCTTGTCTGCTTTGGTTATAGTGGTTAGAAACCGCAGTGA 3973
| | || |||| ||||| | || || || || || ||| | || | | |||
Sbjct 632 CCTAAAGAACCTTATTAAGCTGATTTCAGCGTTAGTAATTGTGATCAGGAGCGATTATGA 691
Query 3974 CATTGTCACTGTAACAGCTACACTTTCCCTGTTGGGGTGCTCCGGGTCACCATGGCGTTG 4033
|| ||||| | ||||| || | ||||| | || || ||| || ||| |||
Sbjct 692 TATGGTCACCCTCACAGCAACTTTAGCCCTGATTGGTTGTCACGGAAGTCCTTGGGCTTG 751
Query 4034 GCTCAAGGCGAAGATATGTTCCATCCTAGGGATCAATATGGCGCAAAAGCAGGCGGACGG 4093
| | || || |||| | |||||| |||| ||| || || || |||||| |
Sbjct 752 GATTAAAGCCAAGACAGCATCCATCTTAGGTATCCCCATCGCCCAGAAGCAGAGTGCTTC 811
Query 4094 CTGGATAAAGAAGTTTACAGAAGCGGTGAATGCCTTTAAGGGTTTAGACTGGATTGCTGC 4153
||| ||||||| |||| || || || |||| ||||||||||| ||||| |
Sbjct 812 TTGGCTAAAGAAATTTAATGATATGGCGAGTGCCGCCAAGGGTTTAGAATGGATATCCAA 871
Query 4154 CAAATTTTCCAAATTCCTCGATTGGATCAAATCAAAAATAATTCCAGAACTTAGGGAAAG 4213
|||| || || ||| | || ||| ||| || || |||||| | | ||| |
Sbjct 872 CAAAATTAGTAAGTTCATTGACTGGCTCAGGGAGAAGATTGTTCCAGCAGCCAAGGAGAA 931
Query 4214 AGCAGAGTTTGTCAAGAACCTTAAGCAACTCCCGCTTCTTGAAGCTCAGATCAATACGCT 4273
|||||| ||| | | || | |||||| | || || | || ||||||| | |
Sbjct 932 AGCAGAATTTTTAACCAATTTGAAGCAATTGCCACTGTTAGAGAACCAGATCACGAACTT 991
Query 4274 CGAGCACTCTAATCCCAACCAGGAGACCCAGGAACAATTGTTTTCAAACGT-TCAGTACC 4332
||||| || | || || ||| || ||| ||||| || || ||| ||||
Sbjct 992 AGAGCAGTCCGCTGCCTCACAAGAGGACCTTGAAGCTATGTTTGGGAATGTGTCA-TACC 1050
Query 4333 TGGCTCACCACTGTAGGAAAAACGCCCCGCTCTACGCAGCAGAGGCGCGGAGGGTTTATG 4392
| || || |||| | || | || | ||||| | || || | | || ||||
Sbjct 1051 TCGCCCATTTCTGTCGCAAGTTCCAACCATTATACGCCACGGAAGCTAAGCGAGTCTATG 1110
Query 4393 CCCTGGAAAAACGAGTATTAGGCGCAA--TGCAGTTCAAGACCAAGAATCGAATTGAACC 4450
|| || || ||| || | | | |||||||||||| ||| | || ||||||||
Sbjct 1111 TTCTAGAGAA--GAGAATGAACAACTACATGCAGTTCAAGAGCAAACACCGTATTGAACC 1168
Query 4451 TGTTTGCTGCCTCATCCATGGCACACCCGGCACCGGTAAGTCCCTTGCCACCACTATCAT 4510
||| || | |||| ||| |||| ||||| || ||||||||||| ||| ||||||
Sbjct 1169 TGTATGTCTCATCATTAGAGGCTCACCAGGCACTGGAAAGTCCCTTGCGACCGGTATCAT 1228
Query 4511 CGGTAGGAAGATCGCTGAATATGAGAACAGTGGGGTCTACAGCTTACCACCTGATCCTGA 4570
| | || || || || | | || | | || ||| | ||||| || |||||
Sbjct 1229 TGCTCGGGTCATAGCAGACAAGTATCACTCTAGTGTGTACTCACTTCCACCAGACCCTGA 1288
Query 4571 CCACTTTGATGGATACCAAGAGCAGGCAGTGGTTA---TCATGGATGACCTCCACCAGAA 4627
||| ||||| || || || |||| |||||| | | |||||||| || || ||
Sbjct 1289 CCATTTTGACGGGTATAAACAGCA---AGTGGTCACAGTTATGGATGATCTGTGTCAAAA 1345
Query 4628 CCCAGACGGTAAGGACATGAGCCTATTTTGCCAGATGGTCTCCACGACTCCCTTTGTTGT 4687
||| ||||| || |||||| |||||||||||||||| ||||| ||| |
Sbjct 1346 CCCTGACGGCAAAGACATGTCATTATTTTGCCAGATGGTGTCCACCGTGGATTTTATCCC 1405
Query 4688 CCCAATGGCCGCTTTGGAGGATAAGGGCAGGCT-CTTCACCTCCAAATATGTATTGGCCT 4746
|||||||| || | || || ||||| || | |||||| || |||| ||| | || |
Sbjct 1406 ACCAATGGCTTCTCTCGAAGAAAAGGG-AGTTTCCTTCACATCTAAATTTGTTATCGCAT 1464
Query 4747 CGACCAACGC 4756
| ||||||||
Sbjct 1465 CCACCAACGC 1474
>seq945
Length=2018
Score = 120 bits (132), Expect = 1e-23
Identities = 218/312 (70%), Gaps = 8/312 (3%)
Strand=Plus/Minus
Query 1020 CCCCTTAAGTCACCATCAGCAGAGGCGTGCGGGTATAGCGACAGGGTCGCTCAACTTACC 1079
|| || ||||| ||||| || || || || || || || || | || || ||||| |||
Sbjct 1623 CCACTGAAGTCTCCATCCGCTGAAGCTTGTGGTTACAGTGATCGCGTGGCACAACTCACC 1564
Query 1080 CTGGGCAATTCGACCATCACAACGCAGGAGGCGGCAAACATCTGCGTCGGGTATGGGGAA 1139
| || || || ||||| || || |||||||||||||||||| ||||| || || ||
Sbjct 1563 ATTGGGAACTCCACCATTACTACACAGGAGGCGGCAAACATCATAGTCGGTTACGGTGAG 1504
Query 1140 TGGCCATCACACCTGGAC-GACCACGACGCCACGGCAGTTGACAGACCAACCCACCCTGG 1198
||||| ||| | ||| | || |||||||||| || || |||| |||||| | ||| |
Sbjct 1503 TGGCCCTCATA-CTGCTCTGATGACGACGCCACAGCGGTGGACAAACCAACGCGCCCAGA 1445
Query 1199 TGTCTCTTGTG-AGAGATTTTATACCCTCCCGTCAGTTGA--GTGGACTAATACTTGGAA 1255
||| || ||| | || |||||||| || | || | | |||| || | | ||
Sbjct 1444 TGTTTC-GGTGAATAGGTTTTATACACT--GGACACTAAACTGTGGGAAAAGTCATCTAA 1388
Query 1256 AGGTCAATACTGGAAGCTACCAAACGCTCTCACCGAGACTGGGATGTTCGGCCAAAATGC 1315
||| || |||||| | || | | | || ||||| || | || ||||| || ||
Sbjct 1387 GGGTTGGTATTGGAAGTTTCCTGATGTGTTGACTGAGACCGGAGTCTTTGGCCAGAACGC 1328
Query 1316 ACAGTTTCACTA 1327
||||||||||||
Sbjct 1327 ACAGTTTCACTA 1316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 23608207682864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |