Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20nativa_20[genbank_20GCA_5F001447565.1_202015-11-24]
4,443 sequences; 47,933,238 total letters
Query= NC_016403.1
Length=8159
Score E
Sequences producing significant alignments: (Bits) Value
seq4083 87.8 9e-14
>seq4083
Length=3246
Score = 87.8 bits (96), Expect = 9e-14
Identities = 109/148 (74%), Gaps = 6/148 (4%)
Strand=Plus/Minus
Query 7404 GGTGGAATGCCATCAGGTTGCTCCGGAACATCCATCTTTAACAGCATGATCAACAATATC 7463
|| |||||||| ||||||||||| || || ||||| || ||| |||||||||||||||
Sbjct 535 GGGGGAATGCCCTCAGGTTGCTCAGGCACCTCCATTTTCAACTCGATGATCAACAATATC 476
Query 7464 ATTTTGAAAACAATC---ATTCCAATGGCCTACAAGGGAATTGACCTGGATGCTCTTAAG 7520
||| | | |||| || ||| || | | ||| || || || || |||| || ||
Sbjct 475 ATTATTAGAACACTCCTGATTAAAA---CATTCAAAGGGATAGATCTAGATGAACTGAAC 419
Query 7521 ATTTTGGCTTATGGTGATGATGTTTTGG 7548
|| |||| || || |||||||| ||||
Sbjct 418 ATGGTGGCCTACGGGGATGATGTGTTGG 391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 25992300742396
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |