Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20nativa_20[genbank_20GCA_5F001447565.1_202015-11-24] 4,443 sequences; 47,933,238 total letters Query= NC_016403.1 Length=8159 Score E Sequences producing significant alignments: (Bits) Value seq4083 87.8 9e-14 >seq4083 Length=3246 Score = 87.8 bits (96), Expect = 9e-14 Identities = 109/148 (74%), Gaps = 6/148 (4%) Strand=Plus/Minus Query 7404 GGTGGAATGCCATCAGGTTGCTCCGGAACATCCATCTTTAACAGCATGATCAACAATATC 7463 || |||||||| ||||||||||| || || ||||| || ||| ||||||||||||||| Sbjct 535 GGGGGAATGCCCTCAGGTTGCTCAGGCACCTCCATTTTCAACTCGATGATCAACAATATC 476 Query 7464 ATTTTGAAAACAATC---ATTCCAATGGCCTACAAGGGAATTGACCTGGATGCTCTTAAG 7520 ||| | | |||| || ||| || | | ||| || || || || |||| || || Sbjct 475 ATTATTAGAACACTCCTGATTAAAA---CATTCAAAGGGATAGATCTAGATGAACTGAAC 419 Query 7521 ATTTTGGCTTATGGTGATGATGTTTTGG 7548 || |||| || || |||||||| |||| Sbjct 418 ATGGTGGCCTACGGGGATGATGTGTTGG 391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 25992300742396