Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20nativa_20[genbank_20GCA_5F001447565.1_202015-11-24] 4,443 sequences; 47,933,238 total letters Query= NC_021178.1 Length=8785 Score E Sequences producing significant alignments: (Bits) Value seq4094 96.9 2e-16 >seq4094 Length=3074 Score = 96.9 bits (106), Expect = 2e-16 Identities = 120/159 (75%), Gaps = 4/159 (3%) Strand=Plus/Plus Query 3849 TCCTCCGGACCCGTGAATGCGGCTAACCCTAACCCTGGATCAAGTGCTCACAAACCAGTG 3908 |||||||| ||| ||||||||||||| |||||| ||| || ||| ||| |||| | Sbjct 67 TCCTCCGGCCCC-TGAATGCGGCTAATCCTAACTGCGGAGCACATGCCTTCAATCCAGAG 125 Query 3909 AGTGGCTTGTCGTAACGCGCAAGTCTGGGATGGGACCGACTACTTTCGGTGTTCCGTGTT 3968 || | |||||||| | |||| |||| || |||||||||||| |||| |||||||| Sbjct 126 GGTAGTGTGTCGTAATGGGCAACTCTGCAGCGGAACCGACTACTTTGGGTG-TCCGTGTT 184 Query 3969 TCTATTTATT-TTATCAATAAAGTTTTATGGTGACAATC 4006 || |||||| |||| | | |||||||||||||| Sbjct 185 TCCTTTTATTCTTAT-ATTGGCTGCTTATGGTGACAATC 222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27995400614948