Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20suis_20[genbank_20GCA_5F000797535.1_202014-12-09] 306 sequences; 63,839,715 total letters Query= NC_014791.1 Length=9070 Score E Sequences producing significant alignments: (Bits) Value seq10 84.2 1e-12 >seq10 Length=1659822 Score = 84.2 bits (92), Expect = 1e-12 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 7311 CCTGTTTTAGTCGAAGATACATGTCTCTGCTTTAATGCTTTCAATGGACTTCCTGGGCCA 7370 ||||| | || || ||||||||||| |||||||| || || || || ||||| || Sbjct 1655869 CCTGTGATCGTTGAGGATACATGTCTTTGCTTTAACGCGTTAGGCGGTCTCCCTGGCCCT 1655810 Query 7371 TACATAAAATGGTTTTTAAAAGAATTGGGTCTTGAAGGTGTTGTTAAAATGCTGTCAGCA 7430 ||| |||||||||||||||||| | | || | ||||| || ||||||| || || Sbjct 1655809 TACGTAAAATGGTTTTTAAAAGCAATCGGCCCCGAAGGCCTTTATAAAATGTTGGACGCC 1655750 Query 7431 TTTGGAGATAAATCAGCGTACGCACTATGCACATTCGCATA 7471 | | || ||| || || ||| | ||||||| ||||| Sbjct 1655749 TGGGACGACAAAAGCGCTTATGCAGTTTGCACATATGCATA 1655709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28908700481456