Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_014791.1 Length=9070 Score E Sequences producing significant alignments: (Bits) Value seq848 91.5 9e-15 >seq848 Length=19965 Score = 91.5 bits (100), Expect = 9e-15 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 7320 GTCGAAGATACATGTCTCTGCTTTAATGCTTTCAATGGACTTCCTGGGCCATACATAAAA 7379 || ||||| || ||||| ||||||||||| || || || ||||| || ||| ||||| Sbjct 10559 GTTGAAGACACTTGTCTTTGCTTTAATGCGTTAGGCGGTCTCCCTGGCCCTTACGTAAAA 10500 Query 7380 TGGTTTTTAAAAGAATTGGGTCTTGAAGGTGTTGTTAAAATGCTGTCAGCATTTGGAGAT 7439 ||||||||||||| | | || | |||||| || ||||||||| || | | ||| Sbjct 10499 TGGTTTTTAAAAGCAGTCGGCCCTGAAGGCCTTTACAAAATGCTGAACGCCTGGGAAGAC 10440 Query 7440 AAATCAGCGTACGCACTATGCACAT 7464 ||| || || ||||| ||||||| Sbjct 10439 AAAAGCGCTTATGCACTGTGCACAT 10415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28907448369056