Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_017714.1 Length=15867 Score E Sequences producing significant alignments: (Bits) Value seq242198 78.8 9e-11 seq176067 78.8 9e-11 >seq242198 Length=40693 Score = 78.8 bits (86), Expect = 9e-11 Identities = 121/173 (70%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 11013 TTTGGTAATTGGGTTAAAAGCAAAGGAAAGGGAATTGAAGGATGCAGGTAGATTCTTTTC 11072 |||||| || ||||||||||| | | | |||||||| ||| ||| || | |||||| Sbjct 2581 TTTGGTTATAGGGTTAAAAGCTCAAGCGTGTGAATTGAAAAATGAAGGAAGGTACTTTTC 2522 Query 11073 ATTGATGAGTTGGGAGTTAAGAGAGTATTTTGTATTCACAGAGTATTTGATTAAAGAACA 11132 | | |||| ||| | | | | || | | |||||||||| || ||||| ||||| Sbjct 2521 ACTCATGAAGTGGAACATGAAGTTGGATATAGGCATCACAGAGTACTTAATTAAGGAACA 2462 Query 11133 TTTTGTGCCATTATTCAAAGGATTAACTATGGCAGATGATCTACAAACTGTAA 11185 |||| | | | || ||| | |||| |||||| |||||| |||||||| Sbjct 2461 TTTTCTCACTATGTTTCCTGGAATCACTACGGCAGACGATCTAACAACTGTAA 2409 >seq176067 Length=19515 Score = 78.8 bits (86), Expect = 9e-11 Identities = 121/173 (70%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 11013 TTTGGTAATTGGGTTAAAAGCAAAGGAAAGGGAATTGAAGGATGCAGGTAGATTCTTTTC 11072 |||||| || ||||||||||| | | | |||||||| ||| ||| || | |||||| Sbjct 4296 TTTGGTTATAGGGTTAAAAGCTCAAGCGTGTGAATTGAAAAATGAAGGAAGGTACTTTTC 4237 Query 11073 ATTGATGAGTTGGGAGTTAAGAGAGTATTTTGTATTCACAGAGTATTTGATTAAAGAACA 11132 | | |||| ||| | | | | || | | |||||||||| || ||||| ||||| Sbjct 4236 ACTCATGAAGTGGAACATGAAGTTGGATATAGGCATCACAGAGTACTTAATTAAGGAACA 4177 Query 11133 TTTTGTGCCATTATTCAAAGGATTAACTATGGCAGATGATCTACAAACTGTAA 11185 |||| | | | || ||| | |||| |||||| |||||| |||||||| Sbjct 4176 TTTTCTCACTATGTTTCCTGGAATCACTACGGCAGACGATCTAACAACTGTAA 4124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50506495179660