Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= NC_007652.1 Length=14071 Score E Sequences producing significant alignments: (Bits) Value seq26127 82.4 7e-12 >seq26127 Length=14664 Score = 82.4 bits (90), Expect = 7e-12 Identities = 220/319 (69%), Gaps = 18/319 (6%) Strand=Plus/Plus Query 6630 ACAACACCAACAGCCCCAAAAGCAAGCATAGCACCCAAGAACAGACAG--GCAACAACCa 6687 |||||| ||||| | ||| | ||| | | || | || ||||| ||| ||| |||| | Sbjct 1763 ACAACAACAACAACAACAACAACAACAACAACAAC-AACAACAG-CAGCAGCAGCAACAA 1820 Query 6688 aaaaaaCCGAAACGGGCACCacaacaacaagcagagca-aagaaaac--caacaacccaa 6744 || | | | | | | || ||||||||| ||| | | || ||||| ||||||| ||| Sbjct 1821 CAACAGCAGCAGCAGCAACAACAACAACA-GCAAATAACAAAAAAACAGCAACAACACAA 1879 Query 6745 cagagacagcaacaacaactctcaaagcaacaacagaaacaggcaagggcaaagaGGGGC 6804 || ||| ||||| |||| ||| || || || |||| ||| |||| | | Sbjct 1880 CAACAACAACAACA-CAACAACAAAAACAGCAGCAACAACAA-CAACAGCAATAACACAC 1937 Query 6805 CAACACAGCACACAATCAAAGAACAGCCCGAA--ACAACAGCAGGAGAAACAACTACCCC 6862 || |||||||| | ||| |||| | || |||||||||| || |||||| || | Sbjct 1938 AAAAACAGCACAACAACAACAAACAACAACAACAACAACAGCAGCAGCAACAAC-ACACA 1996 Query 6863 ACAGTCAAGAAGAACAACCAGCAGGCCAGCCCCAACAACAAAAACCGAAGAGGAGGCAGA 6922 |||| | || || | | ||||| || ||| ||||||||| ||| || || |||||| Sbjct 1997 ACAGGC-AGCAGCAGCAACAGCA-GCAAGCAACAACAACAACAAC--AACAGCAGGCAGC 2052 Query 6923 AACCACCAAAACAAGAACA 6941 || || |||||||| |||| Sbjct 2053 AA-CAACAAAACAACAACA 2070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 44883266007108