Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_002016.1
Length=1027
Score E
Sequences producing significant alignments: (Bits) Value
seq192717 1324 0.0
>seq192717
Length=982
Score = 1324 bits (1468), Expect = 0.0
Identities = 883/982 (90%), Gaps = 0/982 (0%)
Strand=Plus/Minus
Query 22 AAAGATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTCTCTATCATCCCGTCAGGCCC 81
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 982 AAAGATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATCATCCCGTCAGGCCC 923
Query 82 CCTCAAAGCCGAGATCGCACAGAGACTTGAAGATGTCTTTGCAGGGAAGAACACCGATCT 141
|||||||||||||||||| |||||||| ||| |||||||||||| |||||||| |||||
Sbjct 922 CCTCAAAGCCGAGATCGCGCAGAGACTGGAAAGTGTCTTTGCAGGAAAGAACACAGATCT 863
Query 142 TGAGGTTCTCATGGAATGGCTAAAGACAAGACCAATCCTGTCACCTCTGACTAAGGGGAT 201
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct 862 TGAGGCTCTCATGGAATGGCTAAAGACAAGACCAATCTTGTCACCTCTGACTAAGGGAAT 803
Query 202 TTTAGGATTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTT 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 802 TTTAGGATTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTT 743
Query 262 TGTCCAAAATGCCCTTAATGGGAACGGGGATCCAAATAACATGGACAAAGCAGTTAAACT 321
||||||||||||||| |||||||| ||||| || || |||||||| | ||||||||||||
Sbjct 742 TGTCCAAAATGCCCTAAATGGGAATGGGGACCCGAACAACATGGATAGAGCAGTTAAACT 683
Query 322 GTATAGGAAGCTCAAGAGGGAGATAACATTCCATGGGGCCAAAGAAATCTCACTCAGTTA 381
|| | ||||||||| || || ||||| |||||||||||||| || | ||||| || ||
Sbjct 682 ATACAAGAAGCTCAAAAGAGAAATAACGTTCCATGGGGCCAAGGAGGTGTCACTAAGCTA 623
Query 382 TTCTGCTGGTGCACTTGCCAGTTGTATGGGCCTCATATACAACAGGATGGGGGCTGTGAC 441
||| ||||||||||||||||||| |||||||||||||||||||||||||| | |||||
Sbjct 622 TTCAACTGGTGCACTTGCCAGTTGCATGGGCCTCATATACAACAGGATGGGAACAGTGAC 563
Query 442 CACTGAAGTGGCATTTGGCCTGGTATGTGCAACCTGTGAACAGATTGCTGACTCCCAGCA 501
||| |||| || ||||| || || ||||| || ||||||||||||||||| || |||||
Sbjct 562 CACAGAAGCTGCTTTTGGTCTAGTGTGTGCCACTTGTGAACAGATTGCTGATTCACAGCA 503
Query 502 TCGGTCTCATAGGCAAATGGTGACAACAACCAACCCACTAATCAGACATGAGAACAGAAT 561
||||||||| || ||||||| || || ||||| ||||||||||| ||||| ||||||||
Sbjct 502 TCGGTCTCACAGACAAATGGCTACTACCACCAATCCACTAATCAGGCATGAAAACAGAAT 443
Query 562 GGTTTTAGCCAGCACTACAGCTAAGGCTATGGAGCAAATGGCTGGATCGAGTGAGCAAGC 621
||| | || |||||||| || ||||||||||| || ||||||||||||||||| || ||
Sbjct 442 GGTGCTGGCTAGCACTACGGCAAAGGCTATGGAACAGATGGCTGGATCGAGTGAACAGGC 383
Query 622 AGCAGAGGCCATGGAGGTTGCTAGTCAGGCTAGGCAAATGGTGCAAGCGATGAGAACCAT 681
||||||||||||||||||||||| |||| ||||||| ||||| || || |||||||| ||
Sbjct 382 AGCAGAGGCCATGGAGGTTGCTAATCAGACTAGGCAGATGGTACATGCAATGAGAACTAT 323
Query 682 TGGGACTCATCCTAGCTCCAGTGCTGGTCTGAAAAATGATCTTCTTGAAAATTTGCAGGC 741
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct 322 TGGGACTCATCCTAGCTCCAGTGCTGGTCTGAAAGATGACCTTCTTGAAAATTTGCAGGC 263
Query 742 CTATCAGAAACGAATGGGGGTGCAGATGCAACGGTTCAAGTGATCCTCTCGCTATTGCCG 801
||| ||||| |||||||| ||||||||||| || ||||||||||||||||| ||||| |
Sbjct 262 CTACCAGAAGCGAATGGGAGTGCAGATGCAGCGATTCAAGTGATCCTCTCGTCATTGCAG 203
Query 802 CAAATATCATTGGGATCTTGCACTTGATATTGTGGATTCTTGATCGTCtttttttCAAAT 861
||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 202 CAAATATCATTGGGATCTTGCACCTGATATTGTGGATTACTGATCGTCTTTTTTTCAAAT 143
Query 862 GCATTTACCGTCGCTTTAAATACGGACTGAAAGGAGGGCCTTCTACGGAAGGAGTGCCAA 921
| ||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 142 GTATTTATCGTCGCTTTAAATACGGTTTGAAAAGAGGGCCTTCTACGGAAGGAGTGCCTG 83
Query 922 AGTCTATGAGGGAAGAATATCGAAAGGAACAGCAGAGTGCTGTGGATGCTGACGATGGTC 981
|||| |||||||||||||||| | |||||||||||||||||||||||| |||||||||||
Sbjct 82 AGTCCATGAGGGAAGAATATCAACAGGAACAGCAGAGTGCTGTGGATGTTGACGATGGTC 23
Query 982 ATTTTGTCAGCATAGAGCTGGA 1003
||||||||| ||||||||| ||
Sbjct 22 ATTTTGTCAACATAGAGCTAGA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3170421512804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |