Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_002020.1
Length=890
Score E
Sequences producing significant alignments: (Bits) Value
seq216031 899 0.0
>seq216031
Length=850
Score = 899 bits (996), Expect = 0.0
Identities = 696/828 (84%), Gaps = 0/828 (0%)
Strand=Plus/Minus
Query 63 TGCTTTCTTTGGCATGTCCGCAAACGAGTTGCAGACCAAGAACTAGGTGATGCCCCATTC 122
|| || ||||||||| ||||||| ||| |||||||| | | | | |||||||||||||||
Sbjct 848 TGTTTCCTTTGGCATATCCGCAAGCGATTTGCAGACAATGGATTGGGTGATGCCCCATTC 789
Query 123 CTTGATCGGCTTCGCCGAGATCAGAAATCCCTAAGAGGAAGGGGCAGCACTCTTGGTCTG 182
||||||||||| ||||||||||| || ||| ||| |||||| |||| ||| ||||| ||
Sbjct 788 CTTGATCGGCTCCGCCGAGATCAAAAGTCCTTAAAAGGAAGAGGCAACACCCTTGGCCTC 729
Query 183 GACATCGAGACAGCCACACGTGCTGGAAAGCAGATAGTGGAGCGGATTCTGAAAGAAGAA 242
|| ||||| |||||||| | || ||| || || || ||||| |||| ||||||| |||
Sbjct 728 GATATCGAAACAGCCACTCTTGTTGGGAAACAAATCGTGGAATGGATCTTGAAAGAGGAA 669
Query 243 TCCGATGAGGCACTTAAAATGACCATGGCCTCTGTACCTGCGTCGCGTTACCTAACCGAC 302
||| ||| |||||| |||||| || || ||||||||| | ||||| ||||| | |||
Sbjct 668 TCCAGCGAGACACTTAGAATGACAATTGCATCTGTACCTACTTCGCGCTACCTTTCTGAC 609
Query 303 ATGACTCTTGAGGAAATGTCAAGGGAATGGTCCATGCTCATACCCAAGCAGAAAGTGGCA 362
||||| || |||||||||||| | || |||| ||||||||| || | ||| || | |
Sbjct 608 ATGACCCTCGAGGAAATGTCACGAGACTGGTTCATGCTCATGCCTAGGCAAAAGATAATA 549
Query 363 GGCCCTCTTTGTATCAGAATGGACCAGGCGATCATGGATAAAAACATCATACTGAAAGCG 422
||||||||||| | || ||||||||||| ||||||| || ||||| |||||||||||
Sbjct 548 GGCCCTCTTTGCGTGCGATTGGACCAGGCGGTCATGGAAAAGAACATAGTACTGAAAGCG 489
Query 423 AACTTCAGTGTGATTTTTGACCGGCTGGAGACTCTAATATTGCTAAGGGCTTTCACCGAA 482
||||||||||| || ||| |||| | ||||| | ||| | |||||||||||||| ||
Sbjct 488 AACTTCAGTGTAATCTTTAACCGATTAGAGACCTTGATACTACTAAGGGCTTTCACTGAG 429
Query 483 GAGGGAGCAATTGTTGGCGAAATTTCACCATTGCCTTCTCTTCCAGGACATACTGCTGAG 542
||||||||||| ||||| |||||||||||||| ||||||||||||||||||||| ||||
Sbjct 428 GAGGGAGCAATAGTTGGAGAAATTTCACCATTACCTTCTCTTCCAGGACATACTTATGAG 369
Query 543 GATGTCAAAAATGCAGTTGGAGTCCTCATCGGAGGACTTGAATGGAATGATAACACAGTT 602
|||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||
Sbjct 368 GATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGAATGGAATGGTAACACGGTT 309
Query 603 CGAGTCTCTGAAACTCTACAGAGATTCGCTTGGAGAAGCAGTAATGAGAATGGGAGACCT 662
||||||||||||| | ||||||||||||||||||||| | || |||||||||||||||||
Sbjct 308 CGAGTCTCTGAAAATATACAGAGATTCGCTTGGAGAAACTGTGATGAGAATGGGAGACCT 249
Query 663 CCACTCACTCCAAAACAGAAACGAGAAATGGCGGGAACAATTAGGTCAGAAGTTTGAAGA 722
|||| ||||| | |||||| || || ||||| || ||||| || ||||| ||||| ||
Sbjct 248 TCACTACCTCCAGAGCAGAAATGAAAAGTGGCGAGAGCAATTGGGACAGAAATTTGAGGA 189
Query 723 AATAAGATGGTTGATTGAAGAAGTGAGACACAAACTGAAGGTAACAGAGAATAGTTTTGA 782
|||||| ||||| ||||||||| || | |||| | |||| | |||||||||||||| ||
Sbjct 188 AATAAGGTGGTTAATTGAAGAAATGCGGCACAGATTGAAAGCGACAGAGAATAGTTTCGA 129
Query 783 GCAAATAACATTTATGCAAGCCTTACATCTATTGCTTGAAGTGGAGCAAGAGATAAGAAC 842
|||||||||||||||||||||||||| ||| |||||||||| || |||||||||||| |
Sbjct 128 ACAAATAACATTTATGCAAGCCTTACAACTACTGCTTGAAGTAGAACAAGAGATAAGAGC 69
Query 843 TTTCTCATTTCAGCTTATTTAATAATAAAAAACACCCTTGTTTCTACT 890
|||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 68 TTTCTCGTTTCAGCTTATTTAATGATAAAAAACACCCTTGTTTCTACT 21
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2733451948162
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |