Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_002020.1 Length=890 Score E Sequences producing significant alignments: (Bits) Value seq216031 899 0.0 >seq216031 Length=850 Score = 899 bits (996), Expect = 0.0 Identities = 696/828 (84%), Gaps = 0/828 (0%) Strand=Plus/Minus Query 63 TGCTTTCTTTGGCATGTCCGCAAACGAGTTGCAGACCAAGAACTAGGTGATGCCCCATTC 122 || || ||||||||| ||||||| ||| |||||||| | | | | ||||||||||||||| Sbjct 848 TGTTTCCTTTGGCATATCCGCAAGCGATTTGCAGACAATGGATTGGGTGATGCCCCATTC 789 Query 123 CTTGATCGGCTTCGCCGAGATCAGAAATCCCTAAGAGGAAGGGGCAGCACTCTTGGTCTG 182 ||||||||||| ||||||||||| || ||| ||| |||||| |||| ||| ||||| || Sbjct 788 CTTGATCGGCTCCGCCGAGATCAAAAGTCCTTAAAAGGAAGAGGCAACACCCTTGGCCTC 729 Query 183 GACATCGAGACAGCCACACGTGCTGGAAAGCAGATAGTGGAGCGGATTCTGAAAGAAGAA 242 || ||||| |||||||| | || ||| || || || ||||| |||| ||||||| ||| Sbjct 728 GATATCGAAACAGCCACTCTTGTTGGGAAACAAATCGTGGAATGGATCTTGAAAGAGGAA 669 Query 243 TCCGATGAGGCACTTAAAATGACCATGGCCTCTGTACCTGCGTCGCGTTACCTAACCGAC 302 ||| ||| |||||| |||||| || || ||||||||| | ||||| ||||| | ||| Sbjct 668 TCCAGCGAGACACTTAGAATGACAATTGCATCTGTACCTACTTCGCGCTACCTTTCTGAC 609 Query 303 ATGACTCTTGAGGAAATGTCAAGGGAATGGTCCATGCTCATACCCAAGCAGAAAGTGGCA 362 ||||| || |||||||||||| | || |||| ||||||||| || | ||| || | | Sbjct 608 ATGACCCTCGAGGAAATGTCACGAGACTGGTTCATGCTCATGCCTAGGCAAAAGATAATA 549 Query 363 GGCCCTCTTTGTATCAGAATGGACCAGGCGATCATGGATAAAAACATCATACTGAAAGCG 422 ||||||||||| | || ||||||||||| ||||||| || ||||| ||||||||||| Sbjct 548 GGCCCTCTTTGCGTGCGATTGGACCAGGCGGTCATGGAAAAGAACATAGTACTGAAAGCG 489 Query 423 AACTTCAGTGTGATTTTTGACCGGCTGGAGACTCTAATATTGCTAAGGGCTTTCACCGAA 482 ||||||||||| || ||| |||| | ||||| | ||| | |||||||||||||| || Sbjct 488 AACTTCAGTGTAATCTTTAACCGATTAGAGACCTTGATACTACTAAGGGCTTTCACTGAG 429 Query 483 GAGGGAGCAATTGTTGGCGAAATTTCACCATTGCCTTCTCTTCCAGGACATACTGCTGAG 542 ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||| |||| Sbjct 428 GAGGGAGCAATAGTTGGAGAAATTTCACCATTACCTTCTCTTCCAGGACATACTTATGAG 369 Query 543 GATGTCAAAAATGCAGTTGGAGTCCTCATCGGAGGACTTGAATGGAATGATAACACAGTT 602 |||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||| Sbjct 368 GATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGAATGGAATGGTAACACGGTT 309 Query 603 CGAGTCTCTGAAACTCTACAGAGATTCGCTTGGAGAAGCAGTAATGAGAATGGGAGACCT 662 ||||||||||||| | ||||||||||||||||||||| | || ||||||||||||||||| Sbjct 308 CGAGTCTCTGAAAATATACAGAGATTCGCTTGGAGAAACTGTGATGAGAATGGGAGACCT 249 Query 663 CCACTCACTCCAAAACAGAAACGAGAAATGGCGGGAACAATTAGGTCAGAAGTTTGAAGA 722 |||| ||||| | |||||| || || ||||| || ||||| || ||||| ||||| || Sbjct 248 TCACTACCTCCAGAGCAGAAATGAAAAGTGGCGAGAGCAATTGGGACAGAAATTTGAGGA 189 Query 723 AATAAGATGGTTGATTGAAGAAGTGAGACACAAACTGAAGGTAACAGAGAATAGTTTTGA 782 |||||| ||||| ||||||||| || | |||| | |||| | |||||||||||||| || Sbjct 188 AATAAGGTGGTTAATTGAAGAAATGCGGCACAGATTGAAAGCGACAGAGAATAGTTTCGA 129 Query 783 GCAAATAACATTTATGCAAGCCTTACATCTATTGCTTGAAGTGGAGCAAGAGATAAGAAC 842 |||||||||||||||||||||||||| ||| |||||||||| || |||||||||||| | Sbjct 128 ACAAATAACATTTATGCAAGCCTTACAACTACTGCTTGAAGTAGAACAAGAGATAAGAGC 69 Query 843 TTTCTCATTTCAGCTTATTTAATAATAAAAAACACCCTTGTTTCTACT 890 |||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct 68 TTTCTCGTTTCAGCTTATTTAATGATAAAAAACACCCTTGTTTCTACT 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2733451948162