Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_004906.1 Length=890 Score E Sequences producing significant alignments: (Bits) Value seq216031 857 0.0 >seq216031 Length=850 Score = 857 bits (950), Expect = 0.0 Identities = 688/830 (83%), Gaps = 0/830 (0%) Strand=Plus/Minus Query 61 ACTGCTTTCTTTGGCATGTCCGCAAACGATTTGCAGACCAAGAACTGGGTGATGCCCCAT 120 |||| || ||||||||| ||||||| |||||||||||| | | | ||||||||||||||| Sbjct 850 ACTGTTTCCTTTGGCATATCCGCAAGCGATTTGCAGACAATGGATTGGGTGATGCCCCAT 791 Query 121 TCCTTGACCGGCTTCGCCGAGATCAGAAGTCCCTAAGAGGAAGAGGCAGCACTCTTGGTC 180 ||||||| ||||| ||||||||||| |||||| ||| ||||||||||| ||| ||||| | Sbjct 790 TCCTTGATCGGCTCCGCCGAGATCAAAAGTCCTTAAAAGGAAGAGGCAACACCCTTGGCC 731 Query 181 TGGACATCAGAACTGCCACTCGTGAAGGAAAGCATATAGTGGAGCGGATTCTGGAGGAAG 240 | || ||| ||| ||||||| || || || || || ||||| |||| || | || | Sbjct 730 TCGATATCGAAACAGCCACTCTTGTTGGGAAACAAATCGTGGAATGGATCTTGAAAGAGG 671 Query 241 AATCTGACGAGGCACTTAAAATGACTATCGCTTCAGTGCCTGCTTCACGCTACCTAACTG 300 |||| |||| |||||| |||||| || || || || ||| |||| |||||||| ||| Sbjct 670 AATCCAGCGAGACACTTAGAATGACAATTGCATCTGTACCTACTTCGCGCTACCTTTCTG 611 Query 301 AAATGACTCTTGAGGAAATGTCAAGGGATTGGTTAATGCTCATTCCCAAGCAGAAAGTGA 360 | ||||| || |||||||||||| | || ||||| |||||||| || | ||| || | | Sbjct 610 ACATGACCCTCGAGGAAATGTCACGAGACTGGTTCATGCTCATGCCTAGGCAAAAGATAA 551 Query 361 CAGGGCCCCTTTGCATTAGAATGGACCAGGCAGTAATGGGTAAAACCATCATATTGAAAG 420 ||| || |||||| | || |||||||||| || |||| || | ||| || |||||| Sbjct 550 TAGGCCCTCTTTGCGTGCGATTGGACCAGGCGGTCATGGAAAAGAACATAGTACTGAAAG 491 Query 421 CAAACTTTAGTGTGATTTTTAATCGACTTGAAGCTCTGATACTACTTAGAGCGTTTACAG 480 | ||||| ||||| || ||||| ||| | || | |||||||||| || || || || | Sbjct 490 CGAACTTCAGTGTAATCTTTAACCGATTAGAGACCTTGATACTACTAAGGGCTTTCACTG 431 Query 481 ATGAAGGAGCAATAGTGGGCGAAATCTCACCATTACCTTCCCTTCCAGGACATACTGACG 540 | || ||||||||||| || ||||| |||||||||||||| ||||||||||||||| | | Sbjct 430 AGGAGGGAGCAATAGTTGGAGAAATTTCACCATTACCTTCTCTTCCAGGACATACTTATG 371 Query 541 AGGATGTCAAAAATGCAATTGGGGTCCTCATCGGAGGACTTGAATGGAATGATAACACAG 600 ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | Sbjct 370 AGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGAATGGAATGGTAACACGG 311 Query 601 TTCGAGTCTCTGAAACTCTACAGAGATTCACTTGGAGAAGCAGTGATGAGAATGGGAGAT 660 ||||||||||||||| | ||||||||||| ||||||||| | ||||||||||||||||| Sbjct 310 TTCGAGTCTCTGAAAATATACAGAGATTCGCTTGGAGAAACTGTGATGAGAATGGGAGAC 251 Query 661 CTCCACTCCCTCCAAAACAGAAACGGAAAGTGGAGAGAACAATTGAGCCAGAAGTTTGAA 720 || |||| |||||| | |||||| | ||||||| |||| |||||| | ||||| ||||| Sbjct 250 CTTCACTACCTCCAGAGCAGAAATGAAAAGTGGCGAGAGCAATTGGGACAGAAATTTGAG 191 Query 721 GAGATAAGATGGTTAATTGAAGAAATGCGACATAGGTTAAGAATTACAGAGAATAGCTTT 780 || ||||| |||||||||||||||||||| || || || | | ||||||||||| || Sbjct 190 GAAATAAGGTGGTTAATTGAAGAAATGCGGCACAGATTGAAAGCGACAGAGAATAGTTTC 131 Query 781 GAGCAAATAACCTTTATGCAAGCCTTACAACTATTGCTTGAAGTGGAGCAAGAGATAAGA 840 || |||||||| ||||||||||||||||||||| |||||||||| || |||||||||||| Sbjct 130 GAACAAATAACATTTATGCAAGCCTTACAACTACTGCTTGAAGTAGAACAAGAGATAAGA 71 Query 841 ACTTTCTCGTTTCAGCTTATTTAATGATAAAAAACACCCTTGTTTCTACT 890 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 70 GCTTTCTCGTTTCAGCTTATTTAATGATAAAAAACACCCTTGTTTCTACT 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2733451948162