Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_004907.1 Length=1025 Score E Sequences producing significant alignments: (Bits) Value seq192717 1357 0.0 >seq192717 Length=982 Score = 1357 bits (1504), Expect = 0.0 Identities = 890/982 (91%), Gaps = 0/982 (0%) Strand=Plus/Minus Query 29 AAAGATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTCTCTATCATCCCATCAGGCCC 88 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 982 AAAGATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATCATCCCGTCAGGCCC 923 Query 89 CCTCAAAGCCGAGATCGCGCAGAGACTTGAGGATGTTTTTGCAGGGAAGAACACAGATCT 148 ||||||||||||||||||||||||||| || ||| |||||||| |||||||||||||| Sbjct 922 CCTCAAAGCCGAGATCGCGCAGAGACTGGAAAGTGTCTTTGCAGGAAAGAACACAGATCT 863 Query 149 TGAGGCTCTCATGGAATGGCTAAAGACAAGACCAATCCTGTCACCTCTGACTAAGGGGAT 208 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct 862 TGAGGCTCTCATGGAATGGCTAAAGACAAGACCAATCTTGTCACCTCTGACTAAGGGAAT 803 Query 209 TTTAGGGTTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGATT 268 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 802 TTTAGGATTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTT 743 Query 269 TGTCCAAAATGCCCTAAATGGGAATGGAGACCCAAACAACATGGACAGGGCAGTTAAACT 328 ||||||||||||||||||||||||||| ||||| ||||||||||| || ||||||||||| Sbjct 742 TGTCCAAAATGCCCTAAATGGGAATGGGGACCCGAACAACATGGATAGAGCAGTTAAACT 683 Query 329 ATACAAGAAGCTGAAGAGGGAAATGACATTCCATGGAGCAAAGGAAGTTGCACTCAGTTA 388 |||||||||||| || || ||||| || |||||||| || ||||| || |||| || || Sbjct 682 ATACAAGAAGCTCAAAAGAGAAATAACGTTCCATGGGGCCAAGGAGGTGTCACTAAGCTA 623 Query 389 CTCAACTGGTGCGCTTGCCAGTTGCATGGGTCTCATATACAACCGGATGGGAACAGTGAC 448 ||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct 622 TTCAACTGGTGCACTTGCCAGTTGCATGGGCCTCATATACAACAGGATGGGAACAGTGAC 563 Query 449 CACAGAAGTGGCTCTTGGCCTAGTATGTGCCACTTGTGAACAGATTGCTGATGCCCAACA 508 |||||||| ||| |||| ||||| ||||||||||||||||||||||||||| | || || Sbjct 562 CACAGAAGCTGCTTTTGGTCTAGTGTGTGCCACTTGTGAACAGATTGCTGATTCACAGCA 503 Query 509 TCGGTCCCACAGGCAGATGGCGACTACCACCAACCCACTAATCAGGCATGAGAACAGAAT 568 |||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct 502 TCGGTCTCACAGACAAATGGCTACTACCACCAATCCACTAATCAGGCATGAAAACAGAAT 443 Query 569 GGTACTAGCCAGCACTACGGCTAAGGCCATGGAGCAGATGGCTGGATCAAGTGAGCAGGC 628 ||| || || ||||||||||| ||||| ||||| |||||||||||||| ||||| ||||| Sbjct 442 GGTGCTGGCTAGCACTACGGCAAAGGCTATGGAACAGATGGCTGGATCGAGTGAACAGGC 383 Query 629 AGCAGAAGCCATGGAAGTCGCAAGTCAGGCTAGGCAAATGGTGCAGGCTATGAGGACAAT 688 |||||| |||||||| || || | |||| ||||||| ||||| || || ||||| || || Sbjct 382 AGCAGAGGCCATGGAGGTTGCTAATCAGACTAGGCAGATGGTACATGCAATGAGAACTAT 323 Query 689 TGGGACTCACCCTAGTTCCAGTGCAGGTCTAAAAGATGATCTTATTGAAAATTTGCAGGC 748 ||||||||| ||||| |||||||| ||||| |||||||| ||| |||||||||||||||| Sbjct 322 TGGGACTCATCCTAGCTCCAGTGCTGGTCTGAAAGATGACCTTCTTGAAAATTTGCAGGC 263 Query 749 TTACCAGAAACGGATGGGAGTGCAAATGCAGAGATTCAAGTGATCCTCTCGTTGTTGCAG 808 |||||||| || ||||||||||| |||||| |||||||||||||||||||| |||||| Sbjct 262 CTACCAGAAGCGAATGGGAGTGCAGATGCAGCGATTCAAGTGATCCTCTCGTCATTGCAG 203 Query 809 CAAGTATCATTGGGATATTGCACTTGATATTGTGGATTCTTGATCGTCTTTTCTTCAAAT 868 ||| |||||||||||| |||||| |||||||||||||| |||||||||||| ||||||| Sbjct 202 CAAATATCATTGGGATCTTGCACCTGATATTGTGGATTACTGATCGTCTTTTTTTCAAAT 143 Query 869 GCATTTATCGTCGCTTTAAATACGGTTTGAAAAGAGGGCCTTCTACGGAAGGAGTGCCTG 928 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 142 GTATTTATCGTCGCTTTAAATACGGTTTGAAAAGAGGGCCTTCTACGGAAGGAGTGCCTG 83 Query 929 AGTCTATGAGGGAAGAGTATCGGCAGGAACAGCAGAATGCTGTGGATGTTGACGATGGTC 988 |||| ||||||||||| |||| ||||||||||||| ||||||||||||||||||||||| Sbjct 82 AGTCCATGAGGGAAGAATATCAACAGGAACAGCAGAGTGCTGTGGATGTTGACGATGGTC 23 Query 989 ATTTTGTCAACATAGAGCTGGA 1010 ||||||||||||||||||| || Sbjct 22 ATTTTGTCAACATAGAGCTAGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3164042395072