Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_007363.1 Length=1027 Score E Sequences producing significant alignments: (Bits) Value seq192717 1411 0.0 >seq192717 Length=982 Score = 1411 bits (1564), Expect = 0.0 Identities = 902/982 (92%), Gaps = 0/982 (0%) Strand=Plus/Minus Query 22 AAAAATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTCTCTATCGTCCCGTCAGGCCC 81 ||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct 982 AAAGATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATCATCCCGTCAGGCCC 923 Query 82 CCTCAAAGCCGAGATCGCGCAGAGACTTGAGGATGTCTTTGCAGGAAAGAACACCGATCT 141 ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||| Sbjct 922 CCTCAAAGCCGAGATCGCGCAGAGACTGGAAAGTGTCTTTGCAGGAAAGAACACAGATCT 863 Query 142 CGAGGCTCTCATGGAATGGCTAAAGACAAGACCAATCCTGTCACCTCTGACTAAAGGGAT 201 |||||||||||||||||||||||||||||||||||| |||||||||||||||| || || Sbjct 862 TGAGGCTCTCATGGAATGGCTAAAGACAAGACCAATCTTGTCACCTCTGACTAAGGGAAT 803 Query 202 TTTAGGATTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTT 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 802 TTTAGGATTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTT 743 Query 262 TGTCCAGAATGCCTTAAATGGAAATGGAGATCCAAACAATATGGATAGGGCAGTTAAGCT 321 |||||| |||||| ||||||| ||||| || || ||||| |||||||| |||||||| || Sbjct 742 TGTCCAAAATGCCCTAAATGGGAATGGGGACCCGAACAACATGGATAGAGCAGTTAAACT 683 Query 322 ATACAAGAAGCTGAAAAGAGAAATAACATTCCATGGGGCTAAGGAGGTCGCACTCAGCTA 381 |||||||||||| |||||||||||||| ||||||||||| |||||||| |||| ||||| Sbjct 682 ATACAAGAAGCTCAAAAGAGAAATAACGTTCCATGGGGCCAAGGAGGTGTCACTAAGCTA 623 Query 382 CTCAACCGGTGCACTTGCCAGTTGTATGGGTCTCATATACAACAGGATGGGAACGGTGAC 441 ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| Sbjct 622 TTCAACTGGTGCACTTGCCAGTTGCATGGGCCTCATATACAACAGGATGGGAACAGTGAC 563 Query 442 CACAGAAGTGGCTTTTGGCCTAGTGTGTGCCACTTGTGAGCAGATTGCAGATTCACAGCA 501 |||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||| Sbjct 562 CACAGAAGCTGCTTTTGGTCTAGTGTGTGCCACTTGTGAACAGATTGCTGATTCACAGCA 503 Query 502 TCGGTCTCACAGACAGATGGCAACTACCACCAACCCACTAATCAGGCATGAGAACAGAAT 561 ||||||||||||||| ||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct 502 TCGGTCTCACAGACAAATGGCTACTACCACCAATCCACTAATCAGGCATGAAAACAGAAT 443 Query 562 GGTGCTGGCCAGCACTACAGCTAAGGCTATGGAGCAGATGGCTGGATCGAGTGAGCAGGC 621 ||||||||| |||||||| || ||||||||||| |||||||||||||||||||| ||||| Sbjct 442 GGTGCTGGCTAGCACTACGGCAAAGGCTATGGAACAGATGGCTGGATCGAGTGAACAGGC 383 Query 622 AGCGGAAGCCATGGAGGTTGCTAGTCAGGCTAGGCAGATGGTGCAGGCAATGAGGACAAT 681 ||| || |||||||||||||||| |||| ||||||||||||| || |||||||| || || Sbjct 382 AGCAGAGGCCATGGAGGTTGCTAATCAGACTAGGCAGATGGTACATGCAATGAGAACTAT 323 Query 682 TGGGACTCATCCTAGCTCCAGTGCCGGTCTGAAAGATAATCTTCTTGAAAATTTGCAGGC 741 |||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||| Sbjct 322 TGGGACTCATCCTAGCTCCAGTGCTGGTCTGAAAGATGACCTTCTTGAAAATTTGCAGGC 263 Query 742 CTACCAAAAACGAATGGGAGTGCAAATGCAGCGATTCAAGTGATCCTCTTGTTGTTGCCG 801 |||||| || |||||||||||||| |||||||||||||||||||||||| || |||| | Sbjct 262 CTACCAGAAGCGAATGGGAGTGCAGATGCAGCGATTCAAGTGATCCTCTCGTCATTGCAG 203 Query 802 CAAGTATCATTGGGATACTGCACTTGATATTGTGGATTCTTGATCGTCTTTTCTTCAAAT 861 ||| |||||||||||| ||||| |||||||||||||| |||||||||||| ||||||| Sbjct 202 CAAATATCATTGGGATCTTGCACCTGATATTGTGGATTACTGATCGTCTTTTTTTCAAAT 143 Query 862 GCATTTATCGTCGCCTTAAATACGGTTTGAAAAGAGGGCCTTCTACGGAAGGGGTACCTG 921 | |||||||||||| ||||||||||||||||||||||||||||||||||||| || |||| Sbjct 142 GTATTTATCGTCGCTTTAAATACGGTTTGAAAAGAGGGCCTTCTACGGAAGGAGTGCCTG 83 Query 922 AGTCTATGAGGGAAGAGTATCGGCAGGAACAGCAGAGTGCTGTGGATGTTGACGATGGTC 981 |||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||| Sbjct 82 AGTCCATGAGGGAAGAATATCAACAGGAACAGCAGAGTGCTGTGGATGTTGACGATGGTC 23 Query 982 ATTTTGTCAACATAGAGCTGGA 1003 ||||||||||||||||||| || Sbjct 22 ATTTTGTCAACATAGAGCTAGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3170421512804