Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_007364.1
Length=865
Score E
Sequences producing significant alignments: (Bits) Value
seq216031 390 6e-106
>seq216031
Length=850
Score = 390 bits (432), Expect = 6e-106
Identities = 554/774 (72%), Gaps = 4/774 (1%)
Strand=Plus/Minus
Query 94 TGTGTGATGCCCCCTTTGATGACAGGCTCCGAAGAGACCAAAAGGCATTAAAGGGAAGAG 153
|| |||||||||| || ||| ||||||| |||| |||||| | ||||| |||||||
Sbjct 805 TGGGTGATGCCCCATTCCTTGATCGGCTCCGCCGAGATCAAAAGTCCTTAAAAGGAAGAG 746
Query 154 GCAGCACACTTGGACTCGATTTAAGAGTGGCTACAATGGAGGGGAAAAAGATCGTTGAGG 213
||| ||| ||||| |||||| | | || || | | |||||| | ||||| ||
Sbjct 745 GCAACACCCTTGGCCTCGATATCGAAACAGCCACTCTTGTTGGGAAACAAATCGTGGAAT 686
Query 214 ACATCCTGAA-GAGTGAGACAAATGAAAACCTCAAAATAGCCATTGCTTCCAGTCCTGCT 272
||| |||| ||| || | | || | || | ||| | ||||| || ||| ||
Sbjct 685 GGATCTTGAAAGAG-GAATCCAGCGAGACACTTAGAATGACAATTGCATCTGTACCTACT 627
Query 273 CCTCGGTATATCACCGATATGAGCATAGAGGAGATGAGCCGAGAATGGTACATGCTGATG 332
| || || | | || |||| | | ||||| ||| ||||| |||| |||||| |||
Sbjct 626 TCGCGCTACCTTTCTGACATGACCCTCGAGGAAATGTCACGAGACTGGTTCATGCTCATG 567
Query 333 CCTAGGCAGAAAATAACTGGAGGCCTTATGGTGAAAATGGACCAAGCCATAATGGATAAA 392
|||||||| || |||| || ||| ||| | ||||||| || | ||||| ||
Sbjct 566 CCTAGGCAAAAGATAATAGGCCCTCTTTGCGTGCGATTGGACCAGGCGGTCATGGAAAAG 507
Query 393 AGAATTATCCTTAAAGCAAATTTCTCAGTTCTATTTGATCAACTAGAGACATTAGTCTCT 452
| || | || ||||| || ||| || | ||| | | | ||||||| || |
Sbjct 506 AACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATTAGAGACCTTGATACTA 447
Query 453 CTGAGGGCATTCACAGAAAGTGGTGCTATTGTGGCTGAAATATTTCCCATTCCCTCCG-T 511
|| ||||| ||||| || || || || || | ||||| || ||||| ||| | |
Sbjct 446 CTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAAAT-TTCACCATTACCTTCTCT 388
Query 512 ACCAGGACATTTTACAGAGGATGTCAAAAATGCAATTGGAATCCTCATCGGTGGACTTGA 571
||||||||| | |||||||||||||||||| |||| |||||||||| ||||||||
Sbjct 387 TCCAGGACATACTTATGAGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGA 328
Query 572 ATGGAATGATAACTCAATTCGAGCGTCTGAAAATATACAGAGATTCGCTTGGGGAATCCA 631
|||||||| |||| | |||||| ||||||||||||||||||||||||||| ||| |
Sbjct 327 ATGGAATGGTAACACGGTTCGAGTCTCTGAAAATATACAGAGATTCGCTTGGAGAAACTG 268
Query 632 TGATGAGAATGGGGGACCTTCACTCCCTCCAAAACAGAAACGCTACATGGCGAAACGAGT 691
||||||||||||| |||||||||| |||||| | |||||| | | |||||| | | |
Sbjct 267 TGATGAGAATGGGAGACCTTCACTACCTCCAGAGCAGAAATGAAAAGTGGCGAGAGCAAT 208
Query 692 TGAGTCAGAAGTTTGAAGAGATCAGATGGCTCATTGCTGAATGTAGAAATATACTGACAA 751
|| | ||||| ||||| || || || ||| | |||| ||| | | | | ||| |
Sbjct 207 TGGGACAGAAATTTGAGGAAATAAGGTGGTTAATTGAAGAAATGCGGCACAGATTGAAAG 148
Query 752 AGACTGAAAATAGCTTTGAACAGATAACATTTTTGCAAGCATTGCAACTCTTACTTGAAG 811
||| || ||||| || ||||| ||||||||| ||||||| || ||||| | |||||||
Sbjct 147 CGACAGAGAATAGTTTCGAACAAATAACATTTATGCAAGCCTTACAACTACTGCTTGAAG 88
Query 812 TTGAGAGTGAGATAAGGACCTTCTCTTTTCAGCTTATTTAATACTAAAAAACAC 865
| || |||||||| | ||||| |||||||||||||||| ||||||||||
Sbjct 87 TAGAACAAGAGATAAGAGCTTTCTCGTTTCAGCTTATTTAATGATAAAAAACAC 34
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2653712976512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |