Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_007364.1 Length=865 Score E Sequences producing significant alignments: (Bits) Value seq216031 390 6e-106 >seq216031 Length=850 Score = 390 bits (432), Expect = 6e-106 Identities = 554/774 (72%), Gaps = 4/774 (1%) Strand=Plus/Minus Query 94 TGTGTGATGCCCCCTTTGATGACAGGCTCCGAAGAGACCAAAAGGCATTAAAGGGAAGAG 153 || |||||||||| || ||| ||||||| |||| |||||| | ||||| ||||||| Sbjct 805 TGGGTGATGCCCCATTCCTTGATCGGCTCCGCCGAGATCAAAAGTCCTTAAAAGGAAGAG 746 Query 154 GCAGCACACTTGGACTCGATTTAAGAGTGGCTACAATGGAGGGGAAAAAGATCGTTGAGG 213 ||| ||| ||||| |||||| | | || || | | |||||| | ||||| || Sbjct 745 GCAACACCCTTGGCCTCGATATCGAAACAGCCACTCTTGTTGGGAAACAAATCGTGGAAT 686 Query 214 ACATCCTGAA-GAGTGAGACAAATGAAAACCTCAAAATAGCCATTGCTTCCAGTCCTGCT 272 ||| |||| ||| || | | || | || | ||| | ||||| || ||| || Sbjct 685 GGATCTTGAAAGAG-GAATCCAGCGAGACACTTAGAATGACAATTGCATCTGTACCTACT 627 Query 273 CCTCGGTATATCACCGATATGAGCATAGAGGAGATGAGCCGAGAATGGTACATGCTGATG 332 | || || | | || |||| | | ||||| ||| ||||| |||| |||||| ||| Sbjct 626 TCGCGCTACCTTTCTGACATGACCCTCGAGGAAATGTCACGAGACTGGTTCATGCTCATG 567 Query 333 CCTAGGCAGAAAATAACTGGAGGCCTTATGGTGAAAATGGACCAAGCCATAATGGATAAA 392 |||||||| || |||| || ||| ||| | ||||||| || | ||||| || Sbjct 566 CCTAGGCAAAAGATAATAGGCCCTCTTTGCGTGCGATTGGACCAGGCGGTCATGGAAAAG 507 Query 393 AGAATTATCCTTAAAGCAAATTTCTCAGTTCTATTTGATCAACTAGAGACATTAGTCTCT 452 | || | || ||||| || ||| || | ||| | | | ||||||| || | Sbjct 506 AACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATTAGAGACCTTGATACTA 447 Query 453 CTGAGGGCATTCACAGAAAGTGGTGCTATTGTGGCTGAAATATTTCCCATTCCCTCCG-T 511 || ||||| ||||| || || || || || | ||||| || ||||| ||| | | Sbjct 446 CTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAAAT-TTCACCATTACCTTCTCT 388 Query 512 ACCAGGACATTTTACAGAGGATGTCAAAAATGCAATTGGAATCCTCATCGGTGGACTTGA 571 ||||||||| | |||||||||||||||||| |||| |||||||||| |||||||| Sbjct 387 TCCAGGACATACTTATGAGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGA 328 Query 572 ATGGAATGATAACTCAATTCGAGCGTCTGAAAATATACAGAGATTCGCTTGGGGAATCCA 631 |||||||| |||| | |||||| ||||||||||||||||||||||||||| ||| | Sbjct 327 ATGGAATGGTAACACGGTTCGAGTCTCTGAAAATATACAGAGATTCGCTTGGAGAAACTG 268 Query 632 TGATGAGAATGGGGGACCTTCACTCCCTCCAAAACAGAAACGCTACATGGCGAAACGAGT 691 ||||||||||||| |||||||||| |||||| | |||||| | | |||||| | | | Sbjct 267 TGATGAGAATGGGAGACCTTCACTACCTCCAGAGCAGAAATGAAAAGTGGCGAGAGCAAT 208 Query 692 TGAGTCAGAAGTTTGAAGAGATCAGATGGCTCATTGCTGAATGTAGAAATATACTGACAA 751 || | ||||| ||||| || || || ||| | |||| ||| | | | | ||| | Sbjct 207 TGGGACAGAAATTTGAGGAAATAAGGTGGTTAATTGAAGAAATGCGGCACAGATTGAAAG 148 Query 752 AGACTGAAAATAGCTTTGAACAGATAACATTTTTGCAAGCATTGCAACTCTTACTTGAAG 811 ||| || ||||| || ||||| ||||||||| ||||||| || ||||| | ||||||| Sbjct 147 CGACAGAGAATAGTTTCGAACAAATAACATTTATGCAAGCCTTACAACTACTGCTTGAAG 88 Query 812 TTGAGAGTGAGATAAGGACCTTCTCTTTTCAGCTTATTTAATACTAAAAAACAC 865 | || |||||||| | ||||| |||||||||||||||| |||||||||| Sbjct 87 TAGAACAAGAGATAAGAGCTTTCTCGTTTCAGCTTATTTAATGATAAAAAACAC 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2653712976512