Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_007367.1
Length=1027
Score E
Sequences producing significant alignments: (Bits) Value
seq192717 1162 0.0
>seq192717
Length=982
Score = 1162 bits (1288), Expect = 0.0
Identities = 844/977 (86%), Gaps = 0/977 (0%)
Strand=Plus/Minus
Query 22 AAAGATGAGCCTTCTAACCGAGGTCGAAACGTATGTTCTCTCTATCGTTCCATCAGGCCC 81
||||||||| ||||||||||||||||||||||| ||||| |||||| | || ||||||||
Sbjct 982 AAAGATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATCATCCCGTCAGGCCC 923
Query 82 CCTCAAAGCCGAGATCGCGCAGAGACTTGAAGATGTCTTTGCTGGGAAAAACACAGATCT 141
||||||||||||||||||||||||||| ||| ||||||||| || || |||||||||||
Sbjct 922 CCTCAAAGCCGAGATCGCGCAGAGACTGGAAAGTGTCTTTGCAGGAAAGAACACAGATCT 863
Query 142 TGAGGCTCTCATGGAATGGCTAAAGACAAGACCAATTCTGTCACCTCTGACTAAGGGGAT 201
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct 862 TGAGGCTCTCATGGAATGGCTAAAGACAAGACCAATCTTGTCACCTCTGACTAAGGGAAT 803
Query 202 TTTGGGGTTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTT 261
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 802 TTTAGGATTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAGACGCTT 743
Query 262 TGTCCAAAATGCCCTCAATGGGAATGGAGATCCAAATAACATGGACAAAGCAGTTAAACT 321
||||||||||||||| ||||||||||| || || || |||||||| | ||||||||||||
Sbjct 742 TGTCCAAAATGCCCTAAATGGGAATGGGGACCCGAACAACATGGATAGAGCAGTTAAACT 683
Query 322 GTATAGGAAACTTAAGAGGGAGATAACGTTCCATGGGGCCAAAGAAATAGCTCTCAGTTA 381
|| | ||| || || || || |||||||||||||||||||| || | | || || ||
Sbjct 682 ATACAAGAAGCTCAAAAGAGAAATAACGTTCCATGGGGCCAAGGAGGTGTCACTAAGCTA 623
Query 382 TTCTGCTGGTGCACTTGCCAGTTGCATGGGCCTCATATACAATAGGATGGGGGCTGTAAC 441
||| ||||||||||||||||||||||||||||||||||||| |||||||| | || ||
Sbjct 622 TTCAACTGGTGCACTTGCCAGTTGCATGGGCCTCATATACAACAGGATGGGAACAGTGAC 563
Query 442 CACTGAAGTGGCATTTGGCCTGGTATGTGCAACATGTGAACAGATTGCTGACTCCCAGCA 501
||| |||| || ||||| || || ||||| || ||||||||||||||||| || |||||
Sbjct 562 CACAGAAGCTGCTTTTGGTCTAGTGTGTGCCACTTGTGAACAGATTGCTGATTCACAGCA 503
Query 502 CAGGTCTCATAGGCAAATGGTGGCAACAACCAATCCATTAATAAAACATGAGAACAGAAT 561
||||||| || ||||||| | || ||||||||| |||| | ||||| ||||||||
Sbjct 502 TCGGTCTCACAGACAAATGGCTACTACCACCAATCCACTAATCAGGCATGAAAACAGAAT 443
Query 562 GGTTTTGGCCAGCACTACAGCTAAGGCTATGGAGCAAATGGCTGGATCAAGTGAGCAGGC 621
||| |||| |||||||| || ||||||||||| || ||||||||||| ||||| |||||
Sbjct 442 GGTGCTGGCTAGCACTACGGCAAAGGCTATGGAACAGATGGCTGGATCGAGTGAACAGGC 383
Query 622 AGCGGAGGCCATGGAAATTGCTAGTCAGGCCAGGCAAATGGTGCAGGCAATGAGAGCCGT 681
||| ||||||||||| |||||| |||| | ||||| ||||| || ||||||||| | |
Sbjct 382 AGCAGAGGCCATGGAGGTTGCTAATCAGACTAGGCAGATGGTACATGCAATGAGAACTAT 323
Query 682 TGGGACTCATCCTAGCTCCAGTACTGGTCTAAGAGATGATCTTCTTGAAAATTTGCAGAC 741
|||||||||||||||||||||| ||||||| | |||||| |||||||||||||||||| |
Sbjct 322 TGGGACTCATCCTAGCTCCAGTGCTGGTCTGAAAGATGACCTTCTTGAAAATTTGCAGGC 263
Query 742 CTATCAGAAACGAATGGGGGTGCAGATGCAACGATTCAAGTGACCCGCTTGTTGTTGCCG 801
||| ||||| |||||||| ||||||||||| |||||||||||| || || || |||| |
Sbjct 262 CTACCAGAAGCGAATGGGAGTGCAGATGCAGCGATTCAAGTGATCCTCTCGTCATTGCAG 203
Query 802 CGAGTATCATTGGGATCTTGCACTTGATATTGTGGATTCTTGATCGTCtttttttCAAAT 861
| | ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 202 CAAATATCATTGGGATCTTGCACCTGATATTGTGGATTACTGATCGTCTTTTTTTCAAAT 143
Query 862 GCGTCTATCGACTCTTCAAACACGGCCTTAAAAGAGGCCCTTCTACGGAAGGAGTACCTG 921
| | ||||| | ||| ||| |||| | |||||||| ||||||||||||||||| ||||
Sbjct 142 GTATTTATCGTCGCTTTAAATACGGTTTGAAAAGAGGGCCTTCTACGGAAGGAGTGCCTG 83
Query 922 AGTCTATGAGGGAAGAATATCGAAAGGAACAGCAGAATGCTGTGGATGCTGACGACAGTC 981
|||| |||||||||||||||| | |||||||||||| ||||||||||| |||||| |||
Sbjct 82 AGTCCATGAGGGAAGAATATCAACAGGAACAGCAGAGTGCTGTGGATGTTGACGATGGTC 23
Query 982 ATTTTGTCAGCATAGAG 998
||||||||| |||||||
Sbjct 22 ATTTTGTCAACATAGAG 6
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3170421512804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |