Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_007370.1 Length=890 Score E Sequences producing significant alignments: (Bits) Value seq216031 821 0.0 >seq216031 Length=850 Score = 821 bits (910), Expect = 0.0 Identities = 679/828 (82%), Gaps = 0/828 (0%) Strand=Plus/Minus Query 63 TGCTTTCTTTGGCATATCCGGAAACAAGTTGTAGACCAAGAACTGAGTGATGCCCCATTC 122 || || |||||||||||||| || | | ||| |||| | | | || |||||||||||||| Sbjct 848 TGTTTCCTTTGGCATATCCGCAAGCGATTTGCAGACAATGGATTGGGTGATGCCCCATTC 789 Query 123 CTTGATCGGCTTCGCCGAGATCAGAGGTCCCTAAGGGGAAGAGGCAATACTCTCGGTCTA 182 ||||||||||| ||||||||||| | |||| ||| ||||||||||| || || || || Sbjct 788 CTTGATCGGCTCCGCCGAGATCAAAAGTCCTTAAAAGGAAGAGGCAACACCCTTGGCCTC 729 Query 183 GACATCAAAGCAGCCACCCATGTTGGAAAGCAAATTGTAGAAAAGATTCTGAAAGAAGAA 242 || ||| || ||||||| | |||||| || ||||| || ||| ||| ||||||| ||| Sbjct 728 GATATCGAAACAGCCACTCTTGTTGGGAAACAAATCGTGGAATGGATCTTGAAAGAGGAA 669 Query 243 TCTGATGAGGCACTTAAAATGACCATGGTCTCCACACCTGCTTCGCGATACATAACTGAC 302 || ||| |||||| |||||| || | || |||| ||||||| ||| | ||||| Sbjct 668 TCCAGCGAGACACTTAGAATGACAATTGCATCTGTACCTACTTCGCGCTACCTTTCTGAC 609 Query 303 ATGACTATTGAGGAATTGTCAAGAAACTGGTTCATGCTAATGCCCAAGCAGAAAGTGGAA 362 ||||| | |||||| ||||| || ||||||||||||| ||||| | ||| || | | Sbjct 608 ATGACCCTCGAGGAAATGTCACGAGACTGGTTCATGCTCATGCCTAGGCAAAAGATAATA 549 Query 363 GGACCTCTTTGCATCAGAATGGACCAGGCAATCATGGAGAAAAACATCATGTTGAAAGCG 422 || ||||||||| | || |||||||||| ||||||| || ||||| | |||||||| Sbjct 548 GGCCCTCTTTGCGTGCGATTGGACCAGGCGGTCATGGAAAAGAACATAGTACTGAAAGCG 489 Query 423 AATTTCAGTGTGATTTTTGACCGACTAGAGACCATAGTATTACTAAGGGCTTTCACCGAA 482 || |||||||| || ||| ||||| |||||||| | || |||||||||||||||| || Sbjct 488 AACTTCAGTGTAATCTTTAACCGATTAGAGACCTTGATACTACTAAGGGCTTTCACTGAG 429 Query 483 GAGGGAGCAATTGTTGGCGAAATCTCACCATTGCCTTCTTTTCCAGGACATACTATTGAG 542 ||||||||||| ||||| ||||| |||||||| |||||| |||||||||||||| |||| Sbjct 428 GAGGGAGCAATAGTTGGAGAAATTTCACCATTACCTTCTCTTCCAGGACATACTTATGAG 369 Query 543 GATGTCAAAAATGCAATTGGGGTCCTCATCGGAGGACTTGAATGGAATGATAACACAGTT 602 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| Sbjct 368 GATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGAATGGAATGGTAACACGGTT 309 Query 603 CGAGTCTCTAAAAATCTACAGAGATTCGCTTGGAGAAGCAGTAATGAGAATGGGGGACCT 662 ||||||||| ||||| ||||||||||||||||||||| | || ||||||||||| ||||| Sbjct 308 CGAGTCTCTGAAAATATACAGAGATTCGCTTGGAGAAACTGTGATGAGAATGGGAGACCT 249 Query 663 CCACTTACTCCAAAACAGAAACGGAAAATGGCGAGAACAGCTAGGTCAAAAGTTTGAAGA 722 |||| ||||| | |||||| | ||| |||||||| || | || || || ||||| || Sbjct 248 TCACTACCTCCAGAGCAGAAATGAAAAGTGGCGAGAGCAATTGGGACAGAAATTTGAGGA 189 Query 723 GATAAGATGGCTGATTGAAGAAGTGAGACACAGACTAAAAACAACTGAAAATAGCTTTGA 782 ||||| ||| | ||||||||| || | |||||| | ||| | || || ||||| || || Sbjct 188 AATAAGGTGGTTAATTGAAGAAATGCGGCACAGATTGAAAGCGACAGAGAATAGTTTCGA 129 Query 783 ACAAATAACATTCATGCAAGCATTACAACTGCTGTTTGAAGTGGAACAGGAGATAAGAAC 842 |||||||||||| |||||||| |||||||| ||| ||||||| ||||| ||||||||| | Sbjct 128 ACAAATAACATTTATGCAAGCCTTACAACTACTGCTTGAAGTAGAACAAGAGATAAGAGC 69 Query 843 TTTCTCATTTCAGCTTATTTAATGATAAAAAACACCCTTGTTTCTACT 890 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 68 TTTCTCGTTTCAGCTTATTTAATGATAAAAAACACCCTTGTTTCTACT 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2733451948162